| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08910 | 2:29,493,683-29,494,232 | - | C1H2g22906 | CX2g023223 | LOC_Os02g52800 | - | - | Detail |
| C2H2g30296 | 2:29,495,711-29,496,827 | - | C1H2g21062 | CX2g023223 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| C2H2g10227 | 2:29,497,805-29,503,323 | - | C1H2g20452 | CX2g024302 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| C2H2g03870 | 2:29,507,560-29,512,127 | + | C1H2g09699 | CX2g022681 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| C2H2g04249 | 2:29,512,828-29,516,611 | - | C1H2g10695 | CX2g018835 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| C2H2g14519 | 2:29,521,175-29,522,335 | - | C1H2g09946 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C2H2g22142 | 2:29,523,372-29,526,110 | - | C1H2g24330 | CX2g019076 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| C2H2g08643 | 2:29,530,282-29,534,177 | - | C1H2g03367 | CX2g023311 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| C2H2g01609 | 2:29,535,391-29,536,407 | + | C1H2g00086 | CX2g020134 | LOC_Os02g52870 | Os02g0767600 | - | Detail |
| C2H2g28311 | 2:29,537,213-29,541,148 | - | C1H2g22835 | CX2g019177 | LOC_Os02g52880 | Os02g0767700 | - | Detail |
| C2H2g21758 | 2:29,542,259-29,542,978 | - | C1H2g23870 | CX2g019177 | LOC_Os02g35240 | Os02g0767800 | - | Detail |
| C2H2g16642 | 2:29,561,325-29,561,950 | + | C1H2g13024 | CX2g020174 | LOC_Os02g52900 | Os02g0767900 | - | Detail |
| C2H2g15864 | 2:29,564,029-29,565,687 | - | C1H2g31571 | CX2g023130 | LOC_Os02g52910 | Os02g0768000 | - | Detail |
| C2H2g21836 | 2:29,566,550-29,569,228 | - | C1H2g24818 | CX2g024813 | LOC_Os02g52920 | Os02g0768200 | - | Detail |
| C2H2g12824 | 2:29,572,113-29,572,737 | - | C1H2g14907 | CX2g021956 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| C2H2g10491 | 2:29,572,760-29,574,566 | - | C1H2g14907 | CX2g021956 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| C2H2g22351 | 2:29,579,192-29,579,647 | - | - | CX2g021495 | - | - | - | Detail |
| C2H2g21002 | 2:29,582,700-29,585,606 | + | C1H2g22451 | CX2g022546 | LOC_Os02g52940 | Os02g0768600 | OsPPa6 | Detail |
| C2H2g28173 | 2:29,588,093-29,588,968 | - | - | CX2g018930 | LOC_Os02g52950 | Os02g0768700 | - | Detail |
| C2H2g14167 | 2:29,597,203-29,608,909 | + | C1H2g22170 | CX2g021081 | LOC_Os02g52960 | Os02g0768800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040674 | 5:11,359,074-11,359,295 | + | - | - | - | - | - | Detail |
| CX5g038824 | 5:11,364,147-11,364,558 | + | C1H5g08150 | C2H5g00677 | - | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| CX5g039125 | 5:11,364,586-11,365,134 | - | - | - | - | - | - | Detail |
| CX5g038913 | 5:11,369,432-11,369,656 | - | - | - | - | - | - | Detail |
| CX5g039051 | 5:11,371,989-11,372,591 | - | - | C2H5g01000 | - | - | - | Detail |
| CX5g039379 | 5:11,379,627-11,380,055 | - | - | - | - | - | - | Detail |
| CX5g037400 | 5:11,394,936-11,395,343 | + | C1H5g23960 | C2H5g13191 | LOC_Os05g23470 | Os05g0299700 | - | Detail |
| CX5g041087 | 5:11,409,233-11,410,803 | + | C1H5g16907 | C2H5g29124 | LOC_Os05g23450 | Os05g0125600 | - | Detail |
| CX5g039100 | 5:11,413,507-11,418,103 | - | C1H5g10724 | C2H5g22808 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| CX5g039656 | 5:11,420,027-11,420,320 | - | - | - | LOC_Os05g23680 | - | - | Detail |
| CX5g040785 | 5:11,421,518-11,421,667 | + | - | - | - | - | - | Detail |
| CX5g037270 | 5:11,431,706-11,436,577 | + | C1H5g22140 | C2H5g10787 | LOC_Os05g23430 | Os05g0299300 | - | Detail |
| CX5g037770 | 5:11,438,865-11,443,903 | + | C1H5g26259 | C2H5g08398 | LOC_Os05g23420 | Os05g0299200 | - | Detail |
| CX5g037566 | 5:11,448,132-11,448,362 | + | - | - | - | Os05g0299101 | - | Detail |
| CX5g038267 | 5:11,449,048-11,449,257 | + | - | - | - | - | - | Detail |
| CX5g039540 | 5:11,454,641-11,456,749 | + | C1H5g16206 | C2H5g16507 | LOC_Os05g23840 | Os05g0304100 | - | Detail |
| CX5g038810 | 5:11,461,412-11,465,919 | + | C1H5g08335 | C2H5g25548 | LOC_Os05g23860 | Os05g0304400 | OsGDI2 | Detail |
| CX5g039261 | 5:11,473,536-11,478,576 | + | C1H5g06395 | C2H5g22505 | LOC_Os05g23880 | Os05g0304600 | - | Detail |
| CX5g037017 | 5:11,503,870-11,510,714 | - | C1H5g01632 | C2H5g01064 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| CX5g038283 | 5:11,524,433-11,532,890 | + | C1H5g22159 | C2H5g30014 | LOC_Os05g23940 | Os05g0305100 | - | Detail |