| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g22158 | 5:13,986,681-13,989,787 | + | C2H5g23177 | CX5g038457 | LOC_Os05g30210 | Os05g0365200 | - | Detail |
| C1H5g22274 | 5:14,012,101-14,015,955 | - | C2H5g10476 | CX5g038613 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g14452 | 5:14,029,052-14,033,599 | - | C2H5g18448 | CX5g038142 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g23340 | 5:14,037,074-14,039,806 | + | C2H5g26348 | CX5g040490 | LOC_Os05g30240 | Os05g0365500 | - | Detail |
| C1H5g05965 | 5:14,045,098-14,048,958 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0365600 | - | Detail |
| C1H5g07103 | 5:14,051,629-14,055,845 | + | C2H5g19932 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g06032 | 5:14,063,627-14,064,868 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g22626 | 5:14,066,560-14,069,518 | + | C2H5g06194 | - | LOC_Os05g30300 | Os05g0366000 | - | Detail |
| C1H5g00288 | 5:14,072,103-14,073,005 | + | C2H5g06194 | - | LOC_Os05g30320 | Os05g0366200 | - | Detail |
| C1H5g03731 | 5:14,077,566-14,080,598 | + | C2H5g29713 | - | LOC_Os05g30340 | Os05g0366300 | - | Detail |
| C1H5g19288 | 5:14,082,121-14,083,217 | - | - | - | - | - | - | Detail |
| C1H5g23717 | 5:14,088,103-14,088,480 | - | C2H1g27901 | CX4g033665 | - | - | - | Detail |
| C1H5g27352 | 5:14,088,921-14,093,985 | + | C2H5g15031 | - | LOC_Os05g30350 | Os05g0366600 | - | Detail |
| C1H5g25544 | 5:14,097,558-14,111,983 | + | C2H5g04038 | CX3g031021 | LOC_Os05g30390 | Os05g0366600 | - | Detail |
| C1H5g23019 | 5:14,112,189-14,113,871 | - | C2H5g23686 | CX5g039866 | LOC_Os05g30400 | Os05g0366900 | - | Detail |
| C1H5g29124 | 5:14,124,638-14,126,516 | - | C2H5g07643 | CX5g037938 | LOC_Os05g30720 | - | - | Detail |
| C1H5g05278 | 5:14,162,290-14,162,622 | - | C2H4g17808 | CX5g040671 | LOC_Os05g30410 | Os05g0367000 | OsPHF5A2 | Detail |
| C1H5g31214 | 5:14,165,809-14,167,782 | - | C2H5g26184 | CX5g039377 | LOC_Os05g30420 | Os05g0367100 | - | Detail |
| C1H5g00883 | 5:14,170,038-14,173,101 | - | C2H5g02529 | CX5g039616 | LOC_Os05g30430 | Os05g0367200 | - | Detail |
| C1H5g12306 | 5:14,176,946-14,180,279 | - | C2H5g17178 | CX5g039728 | LOC_Os05g30454 | Os05g0367400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040674 | 5:11,359,074-11,359,295 | + | - | - | - | - | - | Detail |
| CX5g038824 | 5:11,364,147-11,364,558 | + | C1H5g08150 | C2H5g00677 | - | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| CX5g039125 | 5:11,364,586-11,365,134 | - | - | - | - | - | - | Detail |
| CX5g038913 | 5:11,369,432-11,369,656 | - | - | - | - | - | - | Detail |
| CX5g039051 | 5:11,371,989-11,372,591 | - | - | C2H5g01000 | - | - | - | Detail |
| CX5g039379 | 5:11,379,627-11,380,055 | - | - | - | - | - | - | Detail |
| CX5g037400 | 5:11,394,936-11,395,343 | + | C1H5g23960 | C2H5g13191 | LOC_Os05g23470 | Os05g0299700 | - | Detail |
| CX5g041087 | 5:11,409,233-11,410,803 | + | C1H5g16907 | C2H5g29124 | LOC_Os05g23450 | Os05g0125600 | - | Detail |
| CX5g039100 | 5:11,413,507-11,418,103 | - | C1H5g10724 | C2H5g22808 | LOC_Os05g23440 | Os05g0299500 | - | Detail |
| CX5g039656 | 5:11,420,027-11,420,320 | - | - | - | LOC_Os05g23680 | - | - | Detail |
| CX5g040785 | 5:11,421,518-11,421,667 | + | - | - | - | - | - | Detail |
| CX5g037270 | 5:11,431,706-11,436,577 | + | C1H5g22140 | C2H5g10787 | LOC_Os05g23430 | Os05g0299300 | - | Detail |
| CX5g037770 | 5:11,438,865-11,443,903 | + | C1H5g26259 | C2H5g08398 | LOC_Os05g23420 | Os05g0299200 | - | Detail |
| CX5g037566 | 5:11,448,132-11,448,362 | + | - | - | - | Os05g0299101 | - | Detail |
| CX5g038267 | 5:11,449,048-11,449,257 | + | - | - | - | - | - | Detail |
| CX5g039540 | 5:11,454,641-11,456,749 | + | C1H5g16206 | C2H5g16507 | LOC_Os05g23840 | Os05g0304100 | - | Detail |
| CX5g038810 | 5:11,461,412-11,465,919 | + | C1H5g08335 | C2H5g25548 | LOC_Os05g23860 | Os05g0304400 | OsGDI2 | Detail |
| CX5g039261 | 5:11,473,536-11,478,576 | + | C1H5g06395 | C2H5g22505 | LOC_Os05g23880 | Os05g0304600 | - | Detail |
| CX5g037017 | 5:11,503,870-11,510,714 | - | C1H5g01632 | C2H5g01064 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| CX5g038283 | 5:11,524,433-11,532,890 | + | C1H5g22159 | C2H5g30014 | LOC_Os05g23940 | Os05g0305100 | - | Detail |