| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05770 | 3:12,121,330-12,124,833 | + | C2H3g06071 | CX3g031073 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| C1H3g06132 | 3:12,125,485-12,127,722 | - | C2H3g19901 | CX3g030920 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| C1H3g21571 | 3:12,129,195-12,132,058 | - | C2H3g13826 | CX3g031321 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| C1H3g12783 | 3:12,137,479-12,139,967 | - | C2H3g28171 | CX3g028805 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| C1H3g04093 | 3:12,143,997-12,147,716 | - | C2H3g03916 | CX3g029486 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| C1H3g10870 | 3:12,158,192-12,161,185 | - | C2H3g11837 | CX3g028879 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| C1H3g31470 | 3:12,170,300-12,173,233 | + | C2H3g26682 | CX3g029746 | LOC_Os03g24070 | Os03g0356498 | - | Detail |
| C1H3g17743 | 3:12,199,252-12,203,723 | + | C2H3g08808 | CX3g025443 | LOC_Os03g24160 | Os03g0356582 | - | Detail |
| C1H3g08944 | 3:12,203,997-12,209,435 | + | C2H3g17773 | CX3g026195 | LOC_Os03g24170 | Os03g0356596 | - | Detail |
| C1H3g10425 | 3:12,211,416-12,223,031 | - | C2H3g23180 | CX3g030641 | LOC_Os03g24180 | Os03g0356638 | - | Detail |
| C1H3g18732 | 3:12,228,197-12,232,366 | - | C2H3g21028 | - | LOC_Os03g24184 | Os03g0356652 | - | Detail |
| C1H3g13461 | 3:12,238,493-12,247,765 | - | C2H3g17361 | CX3g027125 | - | - | - | Detail |
| C1H3g23838 | 3:12,260,339-12,272,066 | + | C2H3g17190 | CX3g026980 | LOC_Os03g24220 | Os03g0356700 | - | Detail |
| C1H3g26654 | 3:12,300,781-12,317,324 | - | C2H3g04618 | CX3g025978 | LOC_Os03g24339 | Os03g0358000 | - | Detail |
| C1H3g20604 | 3:12,323,583-12,326,716 | + | C2H3g25339 | CX3g027667 | LOC_Os03g24380 | Os03g0358100 | OsPHGPX | Detail |
| C1H3g15120 | 3:12,328,181-12,330,447 | - | C2H3g18105 | CX3g026378 | LOC_Os03g24390 | Os03g0358200 | - | Detail |
| C1H3g25429 | 3:12,330,989-12,331,724 | - | C2H3g18105 | CX3g026378 | LOC_Os03g24390 | Os03g0358200 | - | Detail |
| C1H3g03806 | 3:12,337,343-12,338,848 | + | C2H3g29820 | CX3g027747 | LOC_Os03g24430 | Os03g0358800 | - | Detail |
| C1H3g03929 | 3:12,340,514-12,340,877 | + | C2H3g02173 | - | - | - | - | Detail |
| C1H3g20488 | 3:12,347,514-12,355,111 | - | C2H3g26481 | CX3g029410 | LOC_Os03g24450 | Os03g0359000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040384 | 5:9,096,887-9,097,078 | + | - | - | - | - | - | Detail |
| CX5g039165 | 5:9,112,321-9,112,770 | + | - | - | - | - | - | Detail |
| CX5g040110 | 5:9,115,502-9,116,937 | - | C1H5g26341 | C2H5g28905 | LOC_Os05g19570 | Os05g0276500 | OsEXPA3 | Detail |
| CX5g038334 | 5:9,134,752-9,134,916 | + | - | - | - | - | - | Detail |
| CX5g037624 | 5:9,139,090-9,139,431 | + | - | - | - | - | - | Detail |
| CX5g038660 | 5:9,145,141-9,146,157 | - | C1H5g09212 | C2H5g07930 | LOC_Os05g19600 | Os05g0277000 | - | Detail |
| CX5g038816 | 5:9,159,002-9,162,706 | + | - | C2H5g11738 | LOC_Os05g19620 | Os05g0277200 | - | Detail |
| CX5g040958 | 5:9,164,876-9,167,411 | - | C1H5g06044 | C2H5g03374 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| CX5g038137 | 5:9,194,114-9,194,934 | + | C1H5g02530 | C2H5g20956 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| CX5g040048 | 5:9,202,969-9,203,647 | + | - | - | - | - | - | Detail |
| CX5g036963 | 5:9,240,506-9,241,282 | - | - | - | - | - | - | Detail |
| CX5g038587 | 5:9,244,030-9,244,350 | + | - | - | LOC_Os03g35849 | Os06g0361500 | - | Detail |
| CX5g040289 | 5:9,251,693-9,252,007 | + | - | - | - | - | - | Detail |
| CX5g036837 | 5:9,253,788-9,254,048 | - | - | C2H5g19106 | LOC_Os07g35720 | Os07g0541600 | - | Detail |
| CX5g037933 | 5:9,256,713-9,257,716 | - | C1H5g11498 | C2H5g25018 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| CX5g037922 | 5:9,262,951-9,263,439 | - | C1H5g11498 | C2H5g25018 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| CX5g039844 | 5:9,277,077-9,279,385 | - | - | C2H5g00557 | - | - | - | Detail |
| CX5g037435 | 5:9,286,032-9,287,284 | + | C1H5g14640 | C2H5g09281 | LOC_Os05g02720 | Os05g0208600 | - | Detail |
| CX5g039281 | 5:9,289,958-9,298,376 | - | C1H5g29704 | C2H5g28009 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| CX5g037702 | 5:9,317,030-9,322,417 | + | C1H5g23736 | C2H5g12080 | LOC_Os05g19970 | Os05g0279400 | - | Detail |