| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25229 | 4:15,794,678-15,801,442 | + | C1H4g16826 | CX4g032461 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |
| C2H4g08291 | 4:15,804,992-15,811,254 | - | C1H4g08250 | CX4g033731 | LOC_Os04g31340 | Os04g0382300 | - | Detail |
| C2H4g21907 | 4:15,824,605-15,830,076 | + | C1H4g23640 | CX4g033213 | LOC_Os04g31390 | Os04g0382700 | - | Detail |
| C2H4g11523 | 4:15,836,091-15,839,486 | + | C1H4g29507 | CX4g031504 | LOC_Os04g31400 | Os04g0382800 | - | Detail |
| C2H4g17370 | 4:15,913,333-15,914,224 | + | - | - | - | - | - | Detail |
| C2H4g25485 | 4:15,931,863-15,933,250 | - | C1H4g27689 | CX4g031500 | LOC_Os04g31610 | Os04g0385600 | - | Detail |
| C2H4g09951 | 4:15,993,743-15,994,288 | + | C1H4g28157 | CX4g036232 | LOC_Os04g31670 | Os04g0386300 | - | Detail |
| C2H4g19704 | 4:16,003,534-16,005,941 | + | C1H4g01776 | CX4g034133 | LOC_Os04g31690 | Os04g0386500 | - | Detail |
| C2H4g09573 | 4:16,006,671-16,011,720 | - | C1H4g26815 | CX4g031487 | LOC_Os04g31700 | Os04g0386600 | - | Detail |
| C2H4g14766 | 4:16,012,438-16,013,706 | + | C1H4g21589 | CX4g036353 | LOC_Os04g31710 | Os04g0386700 | - | Detail |
| C2H4g24192 | 4:16,016,241-16,016,962 | - | C1H4g05500 | CX4g032722 | LOC_Os04g31730 | Os04g0386900 | - | Detail |
| C2H4g21209 | 4:16,039,785-16,039,997 | + | C1H4g13044 | CX4g034278 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g17117 | 4:16,052,858-16,056,057 | + | C1H4g13813 | CX4g031777 | LOC_Os04g31790 | Os04g0387300 | - | Detail |
| C2H4g01397 | 4:16,061,878-16,080,060 | + | C1H4g20734 | CX4g031777 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g11321 | 4:16,090,868-16,092,505 | + | C1H4g27855 | CX4g036291 | LOC_Os04g31880 | Os04g0388000 | - | Detail |
| C2H4g19348 | 4:16,122,233-16,129,901 | + | C1H4g11099 | CX4g033923 | LOC_Os04g31900 | Os04g0388500 | - | Detail |
| C2H4g18326 | 4:16,130,559-16,133,214 | - | C1H4g07543 | CX4g035641 | LOC_Os04g31910 | Os04g0388601 | - | Detail |
| C2H4g10433 | 4:16,140,780-16,145,134 | + | C1H4g09954 | CX4g031743 | LOC_Os04g31924 | Os04g0388700 | - | Detail |
| C2H4g06056 | 4:16,147,299-16,150,489 | + | C1H4g09321 | CX4g034542 | LOC_Os04g31940 | Os04g0388800 | - | Detail |
| C2H4g16596 | 4:16,152,682-16,155,851 | - | C1H4g17922 | CX4g034481 | LOC_Os04g31950 | Os04g0388900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040139 | 5:8,847,694-8,849,301 | + | - | - | - | - | - | Detail |
| CX5g040099 | 5:8,867,964-8,870,193 | - | - | C2H5g18898 | LOC_Os05g18810 | - | - | Detail |
| CX5g038788 | 5:8,890,489-8,894,813 | - | C1H5g21508 | C2H5g06365 | LOC_Os05g18790 | Os05g0270800 | - | Detail |
| CX5g040066 | 5:8,894,895-8,900,479 | + | C1H5g22297 | C2H5g07418 | LOC_Os05g18780 | - | - | Detail |
| CX5g038825 | 5:8,901,727-8,903,332 | + | C1H5g23740 | C2H5g07418 | LOC_Os05g18780 | Os05g0270500 | - | Detail |
| CX5g038469 | 5:8,905,491-8,905,883 | - | - | - | LOC_Os05g18774 | Os05g0270400 | OsINH3 | Detail |
| CX5g040763 | 5:8,947,936-8,950,260 | + | C1H5g07422 | C2H5g13254 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| CX5g037672 | 5:8,958,546-8,964,553 | + | C1H5g07422 | C2H5g14736 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| CX5g038173 | 5:8,969,880-8,973,511 | - | C1H5g12896 | C2H5g22742 | LOC_Os05g18750 | Os05g0270000 | - | Detail |
| CX5g039617 | 5:8,979,483-8,979,947 | + | - | - | - | - | - | Detail |
| CX5g040818 | 5:8,980,042-8,981,676 | - | C1H5g04723 | C2H5g20813 | LOC_Os05g19150 | Os05g0273800 | - | Detail |
| CX5g037963 | 5:8,997,438-9,005,767 | + | C1H5g24613 | C2H5g23596 | LOC_Os05g19270 | Os05g0274200 | MSH2, OsMSH2 | Detail |
| CX5g038105 | 5:9,009,505-9,015,396 | + | C1H5g22471 | C2H5g05262 | LOC_Os05g19280 | Os05g0274300 | - | Detail |
| CX5g037705 | 5:9,020,246-9,020,698 | + | - | - | - | - | - | Detail |
| CX5g040495 | 5:9,033,191-9,034,767 | + | C1H5g09467 | C2H5g00274 | LOC_Os05g19370 | Os05g0274900 | - | Detail |
| CX5g040741 | 5:9,037,999-9,040,380 | - | C1H5g23375 | C2H5g21767 | LOC_Os05g19380 | Os05g0275000 | - | Detail |
| CX5g040347 | 5:9,045,206-9,048,025 | - | C1H5g00832 | C2H5g00793 | LOC_Os05g19390 | Os05g0275100 | OsPPR939 | Detail |
| CX5g040797 | 5:9,053,656-9,054,412 | + | C1H5g06892 | C2H5g02127 | - | - | - | Detail |
| CX5g039057 | 5:9,057,057-9,058,038 | + | C1H5g06892 | C2H5g02127 | - | - | - | Detail |
| CX5g039415 | 5:9,091,716-9,094,207 | + | C1H5g03721 | C2H5g02832 | LOC_Os05g19500 | Os05g0276100 | OsCHX14 | Detail |