| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26745 | 9:17,426,590-17,428,151 | + | C1H9g13766 | CX9g055830 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C2H9g10324 | 9:17,436,093-17,439,429 | + | C1H9g13766 | CX9g055265 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C2H9g01691 | 9:17,443,794-17,445,384 | + | C1H9g07362 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C2H9g08969 | 9:17,448,493-17,449,274 | - | C1H9g25049 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C2H9g07509 | 9:17,453,053-17,456,008 | - | C1H9g07553 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C2H9g28114 | 9:17,461,813-17,465,864 | + | C1H9g01949 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C2H9g04300 | 9:17,477,350-17,478,193 | + | C1H9g05805 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C2H9g16123 | 9:17,481,815-17,484,032 | - | C1H9g07637 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C2H9g26896 | 9:17,495,146-17,497,057 | + | C1H9g29475 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C2H9g28773 | 9:17,523,780-17,528,824 | - | C1H9g30526 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C2H9g02120 | 9:17,532,544-17,535,528 | - | C1H9g28769 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C2H9g25877 | 9:17,538,389-17,546,069 | - | C1H9g03629 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| C2H9g23489 | 9:17,546,316-17,549,213 | - | C1H9g19525 | CX9g056579 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| C2H9g27445 | 9:17,549,627-17,553,215 | - | C1H9g27128 | CX9g056877 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| C2H9g23825 | 9:17,555,063-17,558,905 | + | C1H9g05809 | CX9g055906 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| C2H9g28583 | 9:17,566,927-17,570,294 | + | C1H9g07466 | CX9g056800 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| C2H9g03363 | 9:17,570,757-17,573,848 | + | C1H9g12433 | CX9g057922 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| C2H9g23341 | 9:17,581,105-17,582,729 | + | C1H9g17904 | CX9g056469 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| C2H9g22638 | 9:17,584,226-17,593,186 | + | C1H9g17327 | CX9g057701 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| C2H9g01014 | 9:17,593,927-17,596,071 | + | C1H9g09404 | CX9g055918 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040139 | 5:8,847,694-8,849,301 | + | - | - | - | - | - | Detail |
| CX5g040099 | 5:8,867,964-8,870,193 | - | - | C2H5g18898 | LOC_Os05g18810 | - | - | Detail |
| CX5g038788 | 5:8,890,489-8,894,813 | - | C1H5g21508 | C2H5g06365 | LOC_Os05g18790 | Os05g0270800 | - | Detail |
| CX5g040066 | 5:8,894,895-8,900,479 | + | C1H5g22297 | C2H5g07418 | LOC_Os05g18780 | - | - | Detail |
| CX5g038825 | 5:8,901,727-8,903,332 | + | C1H5g23740 | C2H5g07418 | LOC_Os05g18780 | Os05g0270500 | - | Detail |
| CX5g038469 | 5:8,905,491-8,905,883 | - | - | - | LOC_Os05g18774 | Os05g0270400 | OsINH3 | Detail |
| CX5g040763 | 5:8,947,936-8,950,260 | + | C1H5g07422 | C2H5g13254 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| CX5g037672 | 5:8,958,546-8,964,553 | + | C1H5g07422 | C2H5g14736 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| CX5g038173 | 5:8,969,880-8,973,511 | - | C1H5g12896 | C2H5g22742 | LOC_Os05g18750 | Os05g0270000 | - | Detail |
| CX5g039617 | 5:8,979,483-8,979,947 | + | - | - | - | - | - | Detail |
| CX5g040818 | 5:8,980,042-8,981,676 | - | C1H5g04723 | C2H5g20813 | LOC_Os05g19150 | Os05g0273800 | - | Detail |
| CX5g037963 | 5:8,997,438-9,005,767 | + | C1H5g24613 | C2H5g23596 | LOC_Os05g19270 | Os05g0274200 | MSH2, OsMSH2 | Detail |
| CX5g038105 | 5:9,009,505-9,015,396 | + | C1H5g22471 | C2H5g05262 | LOC_Os05g19280 | Os05g0274300 | - | Detail |
| CX5g037705 | 5:9,020,246-9,020,698 | + | - | - | - | - | - | Detail |
| CX5g040495 | 5:9,033,191-9,034,767 | + | C1H5g09467 | C2H5g00274 | LOC_Os05g19370 | Os05g0274900 | - | Detail |
| CX5g040741 | 5:9,037,999-9,040,380 | - | C1H5g23375 | C2H5g21767 | LOC_Os05g19380 | Os05g0275000 | - | Detail |
| CX5g040347 | 5:9,045,206-9,048,025 | - | C1H5g00832 | C2H5g00793 | LOC_Os05g19390 | Os05g0275100 | OsPPR939 | Detail |
| CX5g040797 | 5:9,053,656-9,054,412 | + | C1H5g06892 | C2H5g02127 | - | - | - | Detail |
| CX5g039057 | 5:9,057,057-9,058,038 | + | C1H5g06892 | C2H5g02127 | - | - | - | Detail |
| CX5g039415 | 5:9,091,716-9,094,207 | + | C1H5g03721 | C2H5g02832 | LOC_Os05g19500 | Os05g0276100 | OsCHX14 | Detail |