| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g13809 | 3:3,321,577-3,322,139 | + | C1H3g20949 | CX3g031164 | LOC_Os03g07540 | Os03g0171700 | OsbHLH153 | Detail |
| C2H3g25444 | 3:3,330,256-3,334,101 | + | C1H3g01760 | CX3g025564 | LOC_Os03g07570 | Os03g0171900 | - | Detail |
| C2H3g13937 | 3:3,335,388-3,340,062 | + | C1H3g16730 | CX3g028125 | LOC_Os03g07580 | Os03g0172000 | - | Detail |
| C2H3g23028 | 3:3,344,208-3,344,453 | + | C1H3g20330 | CX3g030853 | LOC_Os03g07590 | Os03g0172100 | - | Detail |
| C2H3g09147 | 3:3,345,039-3,348,801 | - | C1H3g07122 | CX3g029415 | LOC_Os03g07600 | Os03g0172200 | - | Detail |
| C2H3g19552 | 3:3,357,007-3,357,408 | - | C1H3g18808 | CX3g028336 | LOC_Os03g07620 | Os03g0172400 | - | Detail |
| C2H3g20603 | 3:3,365,333-3,365,701 | - | C1H3g04232 | CX3g028336 | LOC_Os03g07650 | Os03g0172700 | - | Detail |
| C2H3g08092 | 3:3,368,522-3,368,887 | - | C1H3g13321 | CX10g010744 | LOC_Os03g07660 | Os03g0172850 | - | Detail |
| C2H3g14102 | 3:3,370,549-3,370,872 | - | - | - | - | - | - | Detail |
| C2H3g24701 | 3:3,372,459-3,372,812 | - | C1H3g01518 | CX10g010744 | LOC_Os03g07700 | Os03g0172850 | - | Detail |
| C2H3g29081 | 3:3,374,167-3,377,435 | - | C1H3g31090 | CX3g029368 | LOC_Os03g07750 | Os03g0173700 | - | Detail |
| C2H3g18822 | 3:3,385,125-3,390,411 | + | C1H3g10638 | CX3g027068 | LOC_Os03g07790 | Os03g0173900 | - | Detail |
| C2H3g19744 | 3:3,392,861-3,397,143 | + | C1H3g26619 | CX3g029718 | LOC_Os03g07800 | Os03g0174100 | - | Detail |
| C2H3g27947 | 3:3,397,546-3,399,839 | + | C1H3g13737 | CX3g031172 | LOC_Os03g07810 | Os03g0174200 | - | Detail |
| C2H3g27809 | 3:3,401,892-3,405,946 | + | C1H3g17195 | CX3g026937 | LOC_Os03g07820 | Os03g0174300 | - | Detail |
| C2H3g11391 | 3:3,409,425-3,410,372 | + | C1H3g25841 | CX3g026624 | LOC_Os03g07830 | Os03g0174400 | - | Detail |
| C2H3g04037 | 3:3,411,244-3,414,513 | - | C1H3g25794 | CX3g028234 | LOC_Os03g07840 | Os03g0174500 | - | Detail |
| C2H3g05342 | 3:3,414,628-3,420,149 | + | C1H3g00615 | CX3g028498 | LOC_Os03g07850 | Os03g0174600 | - | Detail |
| C2H3g09279 | 3:3,420,990-3,421,355 | + | - | - | - | - | - | Detail |
| C2H3g04138 | 3:3,421,704-3,423,623 | - | C1H3g07752 | CX3g027678 | LOC_Os03g07870 | Os03g0174800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006834 | 1:1,644,946-1,646,070 | + | - | - | - | Os01g0136850 | - | Detail |
| CX1g001331 | 1:1,703,831-1,706,326 | + | C1H1g28723 | C2H1g23235 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| CX1g005618 | 1:1,708,265-1,710,332 | - | C1H1g11863 | C2H1g03427 | LOC_Os01g04600 | Os01g0138600 | - | Detail |
| CX1g001796 | 1:1,716,427-1,717,916 | + | C1H1g20656 | C2H1g25783 | - | Os01g0138800 | - | Detail |
| CX1g006542 | 1:1,719,995-1,722,627 | - | C1H1g06342 | C2H1g07061 | LOC_Os01g04630 | Os01g0138900 | - | Detail |
| CX1g003275 | 1:1,724,767-1,725,968 | + | C1H1g11652 | C2H1g27844 | LOC_Os01g04640 | Os01g0139000 | - | Detail |
| CX1g001840 | 1:1,730,017-1,732,137 | - | C1H1g00241 | C2H1g05789 | LOC_Os01g04650 | Os01g0139200 | - | Detail |
| CX1g002711 | 1:1,742,271-1,743,883 | + | C1H1g05122 | - | LOC_Os01g04660 | Os01g0139600 | - | Detail |
| CX1g005592 | 1:1,747,633-1,747,944 | - | C1H1g03275 | C2H1g10438 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| CX1g005237 | 1:1,749,131-1,749,295 | - | - | - | - | - | - | Detail |
| CX1g006410 | 1:1,754,122-1,754,382 | - | C1H1g00558 | C2H1g06897 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| CX1g001618 | 1:1,766,387-1,767,883 | + | - | C2H1g19050 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| CX1g006468 | 1:1,775,034-1,780,326 | + | C1H1g31447 | C2H1g22483 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| CX1g000444 | 1:1,781,420-1,781,893 | + | C1H11g10773 | C2H1g01847 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| CX1g006554 | 1:1,798,418-1,799,371 | + | - | C2H1g19937 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| CX1g004648 | 1:1,822,752-1,823,855 | + | - | C2H1g00612 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| CX1g002238 | 1:1,836,514-1,843,175 | - | C1H1g09982 | C2H1g12872 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| CX1g004748 | 1:1,848,970-1,852,098 | - | C1H1g01035 | C2H1g10361 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| CX1g006709 | 1:1,857,476-1,862,006 | + | C1H1g10013 | C2H1g30366 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| CX1g005046 | 1:1,862,764-1,866,629 | - | C1H1g07767 | C2H1g30003 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |