| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g27058 | 1:22,384,772-22,386,355 | - | C1H1g11259 | CX1g001039 | LOC_Os01g43550 | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |
| C2H1g20706 | 1:22,397,701-22,401,939 | + | C1H1g00319 | CX1g003323 | LOC_Os01g43580 | Os01g0625200 | - | Detail |
| C2H1g04036 | 1:22,406,624-22,407,725 | + | C1H1g14466 | CX1g003980 | LOC_Os01g43590 | Os01g0625300 | - | Detail |
| C2H1g20132 | 1:22,418,099-22,418,914 | + | C1H1g26404 | - | - | - | - | Detail |
| C2H1g15171 | 1:22,428,869-22,431,655 | - | C1H1g17074 | - | LOC_Os01g43620 | - | - | Detail |
| C2H1g15343 | 1:22,435,613-22,436,006 | - | C1H1g17074 | - | - | - | - | Detail |
| C2H1g29248 | 1:22,436,126-22,444,816 | + | C1H1g10500 | CX1g004459 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| C2H1g04282 | 1:22,445,801-22,446,416 | - | C1H1g23387 | CX1g003074 | - | Os01g0626300 | - | Detail |
| C2H1g17198 | 1:22,451,007-22,453,241 | + | C1H1g04034 | CX1g001615 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| C2H1g05125 | 1:22,463,980-22,466,094 | + | C1H1g09859 | CX1g004444 | LOC_Os01g43670 | Os01g0155000 | - | Detail |
| C2H1g12925 | 1:22,468,084-22,476,525 | - | - | - | - | - | - | Detail |
| C2H1g04147 | 1:22,476,887-22,479,774 | + | C1H1g01575 | CX1g002724 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C2H1g19850 | 1:22,481,631-22,485,305 | - | C1H1g28702 | CX1g002724 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| C2H1g29868 | 1:22,492,974-22,494,961 | - | C1H1g03097 | CX1g006577 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| C2H1g22502 | 1:22,498,248-22,502,159 | + | C1H1g04951 | CX1g002724 | LOC_Os01g43740 | Os01g0627800 | - | Detail |
| C2H1g27924 | 1:22,505,575-22,507,478 | + | C1H1g09293 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g24978 | 1:22,509,995-22,511,966 | + | C1H1g25990 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g07157 | 1:22,515,681-22,517,744 | + | C1H1g21900 | CX1g006577 | LOC_Os01g43774 | Os01g0628000 | - | Detail |
| C2H1g04659 | 1:22,534,549-22,538,745 | + | C1H1g21541 | CX1g003827 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| C2H1g09539 | 1:22,540,668-22,542,685 | + | C1H1g06376 | CX1g003827 | LOC_Os01g43851 | Os01g0628900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006834 | 1:1,644,946-1,646,070 | + | - | - | - | Os01g0136850 | - | Detail |
| CX1g001331 | 1:1,703,831-1,706,326 | + | C1H1g28723 | C2H1g23235 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| CX1g005618 | 1:1,708,265-1,710,332 | - | C1H1g11863 | C2H1g03427 | LOC_Os01g04600 | Os01g0138600 | - | Detail |
| CX1g001796 | 1:1,716,427-1,717,916 | + | C1H1g20656 | C2H1g25783 | - | Os01g0138800 | - | Detail |
| CX1g006542 | 1:1,719,995-1,722,627 | - | C1H1g06342 | C2H1g07061 | LOC_Os01g04630 | Os01g0138900 | - | Detail |
| CX1g003275 | 1:1,724,767-1,725,968 | + | C1H1g11652 | C2H1g27844 | LOC_Os01g04640 | Os01g0139000 | - | Detail |
| CX1g001840 | 1:1,730,017-1,732,137 | - | C1H1g00241 | C2H1g05789 | LOC_Os01g04650 | Os01g0139200 | - | Detail |
| CX1g002711 | 1:1,742,271-1,743,883 | + | C1H1g05122 | - | LOC_Os01g04660 | Os01g0139600 | - | Detail |
| CX1g005592 | 1:1,747,633-1,747,944 | - | C1H1g03275 | C2H1g10438 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| CX1g005237 | 1:1,749,131-1,749,295 | - | - | - | - | - | - | Detail |
| CX1g006410 | 1:1,754,122-1,754,382 | - | C1H1g00558 | C2H1g06897 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| CX1g001618 | 1:1,766,387-1,767,883 | + | - | C2H1g19050 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| CX1g006468 | 1:1,775,034-1,780,326 | + | C1H1g31447 | C2H1g22483 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| CX1g000444 | 1:1,781,420-1,781,893 | + | C1H11g10773 | C2H1g01847 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| CX1g006554 | 1:1,798,418-1,799,371 | + | - | C2H1g19937 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| CX1g004648 | 1:1,822,752-1,823,855 | + | - | C2H1g00612 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| CX1g002238 | 1:1,836,514-1,843,175 | - | C1H1g09982 | C2H1g12872 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| CX1g004748 | 1:1,848,970-1,852,098 | - | C1H1g01035 | C2H1g10361 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| CX1g006709 | 1:1,857,476-1,862,006 | + | C1H1g10013 | C2H1g30366 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| CX1g005046 | 1:1,862,764-1,866,629 | - | C1H1g07767 | C2H1g30003 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |