| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g31580 | 3:27,073,975-27,078,054 | - | C2H3g10695 | CX3g031057 | LOC_Os03g50560 | Os03g0713600 | PIBP1 | Detail |
| C1H3g19275 | 3:27,080,359-27,084,951 | + | C2H3g26349 | CX3g027124 | LOC_Os03g50570 | - | - | Detail |
| C1H3g08842 | 3:27,090,380-27,090,823 | + | C2H3g24928 | CX3g026388 | LOC_Os03g50590 | Os03g0714100 | - | Detail |
| C1H3g03025 | 3:27,096,874-27,101,383 | + | C2H3g05643 | CX3g025972 | LOC_Os03g50620 | Os03g0714400 | - | Detail |
| C1H3g05777 | 3:27,135,899-27,141,801 | + | C2H3g14544 | CX3g026364 | LOC_Os03g50730 | Os03g0715332 | - | Detail |
| C1H3g16416 | 3:27,141,969-27,151,372 | - | C2H3g21803 | CX3g026105 | LOC_Os03g50740 | Os03g0715500 | - | Detail |
| C1H3g22910 | 3:27,155,738-27,158,165 | + | C2H3g28319 | CX3g029092 | LOC_Os03g50760 | Os03g0715600 | - | Detail |
| C1H3g15466 | 3:27,170,402-27,173,393 | - | C2H3g20610 | CX3g028425 | LOC_Os03g50780 | Os03g0716200 | TIP3 | Detail |
| C1H3g13419 | 3:27,193,961-27,197,839 | - | C2H3g20165 | CX3g026031 | LOC_Os03g50810 | Os03g0717000 | OsTMK | Detail |
| C1H3g11111 | 3:27,204,441-27,206,760 | + | C2H3g17240 | CX3g030295 | LOC_Os03g50820 | Os03g0717200 | - | Detail |
| C1H3g17908 | 3:27,211,184-27,217,900 | - | C2H3g18569 | CX3g027168 | LOC_Os03g50850 | Os03g0717600 | - | Detail |
| C1H3g17527 | 3:27,226,256-27,232,312 | + | C2H3g26503 | CX3g030571 | LOC_Os03g50860 | Os03g0717700 | - | Detail |
| C1H3g18557 | 3:27,237,709-27,240,582 | + | C2H3g23833 | CX3g025771 | LOC_Os03g50870 | Os03g0717900 | - | Detail |
| C1H3g24319 | 3:27,241,007-27,244,411 | - | C2H3g04275 | CX3g031328 | LOC_Os03g50880 | Os03g0718000 | OASB2 | Detail |
| C1H3g01613 | 3:27,247,709-27,250,058 | + | C2H3g25200 | CX3g028008 | LOC_Os03g50885 | Os03g0718100 | - | Detail |
| C1H3g10193 | 3:27,251,331-27,256,594 | - | C2H3g25903 | - | - | - | - | Detail |
| C1H3g23147 | 3:27,276,626-27,279,326 | - | C2H3g13023 | CX3g028458 | LOC_Os03g50940 | Os03g0718600 | OsCOX11 | Detail |
| C1H3g22111 | 3:27,292,283-27,296,698 | - | C2H3g23829 | CX3g030965 | LOC_Os03g50970 | Os03g0719000 | - | Detail |
| C1H3g19794 | 3:27,304,558-27,312,123 | + | C2H3g02193 | CX3g028424 | LOC_Os03g50980 | Os03g0719100 | SIZ2, OsSIZ2 | Detail |
| C1H3g27091 | 3:27,314,156-27,321,766 | - | C2H3g22670 | CX3g025374 | LOC_Os03g51000 | Os03g0719300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006834 | 1:1,644,946-1,646,070 | + | - | - | - | Os01g0136850 | - | Detail |
| CX1g001331 | 1:1,703,831-1,706,326 | + | C1H1g28723 | C2H1g23235 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| CX1g005618 | 1:1,708,265-1,710,332 | - | C1H1g11863 | C2H1g03427 | LOC_Os01g04600 | Os01g0138600 | - | Detail |
| CX1g001796 | 1:1,716,427-1,717,916 | + | C1H1g20656 | C2H1g25783 | - | Os01g0138800 | - | Detail |
| CX1g006542 | 1:1,719,995-1,722,627 | - | C1H1g06342 | C2H1g07061 | LOC_Os01g04630 | Os01g0138900 | - | Detail |
| CX1g003275 | 1:1,724,767-1,725,968 | + | C1H1g11652 | C2H1g27844 | LOC_Os01g04640 | Os01g0139000 | - | Detail |
| CX1g001840 | 1:1,730,017-1,732,137 | - | C1H1g00241 | C2H1g05789 | LOC_Os01g04650 | Os01g0139200 | - | Detail |
| CX1g002711 | 1:1,742,271-1,743,883 | + | C1H1g05122 | - | LOC_Os01g04660 | Os01g0139600 | - | Detail |
| CX1g005592 | 1:1,747,633-1,747,944 | - | C1H1g03275 | C2H1g10438 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| CX1g005237 | 1:1,749,131-1,749,295 | - | - | - | - | - | - | Detail |
| CX1g006410 | 1:1,754,122-1,754,382 | - | C1H1g00558 | C2H1g06897 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| CX1g001618 | 1:1,766,387-1,767,883 | + | - | C2H1g19050 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| CX1g006468 | 1:1,775,034-1,780,326 | + | C1H1g31447 | C2H1g22483 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| CX1g000444 | 1:1,781,420-1,781,893 | + | C1H11g10773 | C2H1g01847 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| CX1g006554 | 1:1,798,418-1,799,371 | + | - | C2H1g19937 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| CX1g004648 | 1:1,822,752-1,823,855 | + | - | C2H1g00612 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| CX1g002238 | 1:1,836,514-1,843,175 | - | C1H1g09982 | C2H1g12872 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| CX1g004748 | 1:1,848,970-1,852,098 | - | C1H1g01035 | C2H1g10361 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| CX1g006709 | 1:1,857,476-1,862,006 | + | C1H1g10013 | C2H1g30366 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| CX1g005046 | 1:1,862,764-1,866,629 | - | C1H1g07767 | C2H1g30003 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |