| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g01869 | 9:9,074,428-9,077,094 | + | C2H9g04538 | CX9g055010 | LOC_Os09g17910 | Os09g0348600 | - | Detail |
| C1H9g07181 | 9:9,079,634-9,083,217 | + | C2H9g24049 | CX9g055010 | LOC_Os09g17910 | Os09g0348600 | - | Detail |
| C1H9g03462 | 9:9,091,126-9,095,953 | + | C2H9g24049 | CX9g057279 | LOC_Os09g17910 | Os09g0358000 | - | Detail |
| C1H9g05571 | 9:9,127,867-9,138,016 | + | C2H9g24049 | CX9g055803 | LOC_Os09g19400 | Os09g0358000 | - | Detail |
| C1H9g08745 | 9:9,141,477-9,141,767 | + | - | - | - | - | - | Detail |
| C1H9g20897 | 9:9,148,801-9,149,552 | + | C2H9g02888 | CX9g057843 | LOC_Os09g18000 | Os09g0356800 | - | Detail |
| C1H9g30901 | 9:9,151,942-9,159,860 | + | C2H9g22348 | CX9g055010 | LOC_Os09g18010 | Os09g0349600 | - | Detail |
| C1H9g13402 | 9:9,160,804-9,167,859 | - | C2H9g24613 | CX9g058086 | LOC_Os09g18020 | Os09g0358000 | - | Detail |
| C1H9g15429 | 9:9,170,936-9,172,581 | - | C2H9g16360 | CX9g058086 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| C1H9g17652 | 9:9,193,070-9,193,904 | - | C2H9g11607 | CX9g055660 | LOC_Os09g18159 | Os09g0349800 | - | Detail |
| C1H9g14547 | 9:9,199,305-9,203,435 | - | C2H9g30424 | CX9g054841 | LOC_Os09g18020 | Os09g0356000 | - | Detail |
| C1H9g30812 | 9:9,203,532-9,205,696 | - | C2H9g30424 | CX9g054841 | LOC_Os09g18040 | Os09g0349700 | - | Detail |
| C1H9g21112 | 9:9,220,871-9,221,557 | - | C2H9g22974 | CX9g055660 | LOC_Os09g17890 | Os09g0349800 | - | Detail |
| C1H9g27990 | 9:9,227,869-9,228,309 | - | - | - | LOC_Os03g37730 | - | - | Detail |
| C1H9g19942 | 9:9,234,430-9,237,693 | - | C2H9g07898 | CX9g056907 | LOC_Os09g18159 | Os09g0350900 | - | Detail |
| C1H9g05183 | 9:9,243,019-9,244,553 | - | C2H9g11163 | CX9g056907 | LOC_Os09g18260 | Os09g0349700 | - | Detail |
| C1H9g27029 | 9:9,267,083-9,269,589 | - | C2H9g14989 | CX9g056592 | LOC_Os09g18230 | Os09g0351700 | - | Detail |
| C1H9g30609 | 9:9,272,772-9,275,652 | - | C2H9g14989 | CX9g056592 | LOC_Os09g18230 | Os09g0351800 | - | Detail |
| C1H9g01685 | 9:9,339,461-9,343,371 | - | C2H9g28190 | CX9g055402 | LOC_Os09g18320 | Os09g0352400 | - | Detail |
| C1H9g17851 | 9:9,431,231-9,432,886 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0356000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006834 | 1:1,644,946-1,646,070 | + | - | - | - | Os01g0136850 | - | Detail |
| CX1g001331 | 1:1,703,831-1,706,326 | + | C1H1g28723 | C2H1g23235 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| CX1g005618 | 1:1,708,265-1,710,332 | - | C1H1g11863 | C2H1g03427 | LOC_Os01g04600 | Os01g0138600 | - | Detail |
| CX1g001796 | 1:1,716,427-1,717,916 | + | C1H1g20656 | C2H1g25783 | - | Os01g0138800 | - | Detail |
| CX1g006542 | 1:1,719,995-1,722,627 | - | C1H1g06342 | C2H1g07061 | LOC_Os01g04630 | Os01g0138900 | - | Detail |
| CX1g003275 | 1:1,724,767-1,725,968 | + | C1H1g11652 | C2H1g27844 | LOC_Os01g04640 | Os01g0139000 | - | Detail |
| CX1g001840 | 1:1,730,017-1,732,137 | - | C1H1g00241 | C2H1g05789 | LOC_Os01g04650 | Os01g0139200 | - | Detail |
| CX1g002711 | 1:1,742,271-1,743,883 | + | C1H1g05122 | - | LOC_Os01g04660 | Os01g0139600 | - | Detail |
| CX1g005592 | 1:1,747,633-1,747,944 | - | C1H1g03275 | C2H1g10438 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| CX1g005237 | 1:1,749,131-1,749,295 | - | - | - | - | - | - | Detail |
| CX1g006410 | 1:1,754,122-1,754,382 | - | C1H1g00558 | C2H1g06897 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| CX1g001618 | 1:1,766,387-1,767,883 | + | - | C2H1g19050 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| CX1g006468 | 1:1,775,034-1,780,326 | + | C1H1g31447 | C2H1g22483 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| CX1g000444 | 1:1,781,420-1,781,893 | + | C1H11g10773 | C2H1g01847 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| CX1g006554 | 1:1,798,418-1,799,371 | + | - | C2H1g19937 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| CX1g004648 | 1:1,822,752-1,823,855 | + | - | C2H1g00612 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| CX1g002238 | 1:1,836,514-1,843,175 | - | C1H1g09982 | C2H1g12872 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| CX1g004748 | 1:1,848,970-1,852,098 | - | C1H1g01035 | C2H1g10361 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| CX1g006709 | 1:1,857,476-1,862,006 | + | C1H1g10013 | C2H1g30366 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| CX1g005046 | 1:1,862,764-1,866,629 | - | C1H1g07767 | C2H1g30003 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |