| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17722 | 4:4,872,195-4,872,665 | - | - | CX4g036603 | - | - | - | Detail |
| C2H4g00175 | 4:4,873,750-4,877,314 | + | C1H4g14844 | CX4g033125 | LOC_Os04g10410 | Os04g0182900 | - | Detail |
| C2H4g19427 | 4:4,881,190-4,889,636 | - | C1H4g21941 | CX4g036220 | LOC_Os04g10420 | Os04g0183100 | - | Detail |
| C2H4g17515 | 4:4,893,290-4,895,294 | + | C1H4g31194 | CX4g032018 | - | - | - | Detail |
| C2H4g24119 | 4:4,907,814-4,910,322 | - | - | - | LOC_Os04g11270 | - | - | Detail |
| C2H4g16001 | 4:4,947,294-4,950,151 | - | C1H4g19812 | CX4g032136 | LOC_Os04g09604 | Os04g0176200 | - | Detail |
| C2H4g27334 | 4:4,950,237-4,950,695 | - | C1H4g11860 | CX4g032136 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C2H4g09797 | 4:4,963,988-4,966,434 | - | C1H4g02342 | - | - | - | - | Detail |
| C2H4g18241 | 4:4,968,588-4,971,385 | - | C1H4g02342 | CX4g036220 | LOC_Os04g10420 | Os04g0183100 | - | Detail |
| C2H4g03609 | 4:4,973,594-4,979,159 | + | C1H4g18867 | CX4g035351 | LOC_Os04g10434 | Os04g0183300 | - | Detail |
| C2H4g03433 | 4:4,985,290-4,988,831 | - | C1H4g27199 | - | - | - | - | Detail |
| C2H4g29802 | 4:4,996,715-4,997,323 | + | - | CX4g031657 | - | - | - | Detail |
| C2H4g16056 | 4:5,013,918-5,016,669 | + | C1H4g19839 | CX4g035942 | LOC_Os04g10460 | Os04g0183500 | - | Detail |
| C2H4g03832 | 4:5,066,121-5,069,949 | + | C1H4g20902 | CX4g034818 | LOC_Os04g10530 | Os04g0184100 | - | Detail |
| C2H4g16196 | 4:5,077,523-5,078,359 | + | C1H4g09877 | CX4g035942 | LOC_Os04g10569 | Os04g0184801 | - | Detail |
| C2H4g22298 | 4:5,081,118-5,083,850 | + | C1H4g04912 | CX4g034818 | LOC_Os04g10630 | Os04g0184100 | - | Detail |
| C2H4g20970 | 4:5,086,036-5,086,816 | + | C1H4g10478 | CX4g034818 | LOC_Os04g10640 | Os04g0185000 | - | Detail |
| C2H4g20831 | 4:5,087,847-5,090,494 | - | C1H4g27981 | CX4g035484 | LOC_Os04g10650 | Os04g0185100 | - | Detail |
| C2H4g24476 | 4:5,099,347-5,108,421 | + | C1H4g10822 | CX4g032760 | LOC_Os04g10680 | Os04g0185500 | - | Detail |
| C2H4g03188 | 4:5,194,747-5,196,363 | + | C1H4g26711 | CX4g031974 | LOC_Os04g10750 | Os04g0186400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039529 | 5:7,631,236-7,632,117 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15880 | Os05g0247800 | OsXIP | Detail |
| CX5g040966 | 5:7,637,959-7,644,799 | - | C1H5g04227 | C2H5g09723 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| CX5g038528 | 5:7,655,589-7,656,482 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15920 | Os05g0248200 | - | Detail |
| CX5g040278 | 5:7,656,900-7,657,077 | + | - | - | - | - | - | Detail |
| CX5g038055 | 5:7,663,141-7,665,000 | - | C1H5g29560 | C2H5g16380 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| CX5g038858 | 5:7,678,393-7,678,704 | - | C1H5g10784 | C2H5g23841 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| CX5g036929 | 5:7,689,346-7,689,852 | + | - | - | - | - | - | Detail |
| CX5g039741 | 5:7,690,376-7,690,663 | + | - | - | LOC_Os12g40930 | Os04g0367800 | - | Detail |
| CX5g039101 | 5:7,702,866-7,718,501 | - | C1H5g23916 | C2H5g02175 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| CX5g041055 | 5:7,730,869-7,733,775 | - | C1H5g19855 | C2H5g11862 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039499 | 5:7,743,530-7,744,219 | - | C1H7g31370 | - | - | - | - | Detail |
| CX5g037269 | 5:7,756,773-7,756,991 | - | - | - | - | Os12g0254601 | - | Detail |
| CX5g041082 | 5:7,760,745-7,766,203 | - | C1H12g04637 | C2H5g08541 | LOC_Os05g16500 | - | - | Detail |
| CX5g038245 | 5:7,769,534-7,773,025 | - | C1H5g18798 | C2H5g10190 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039794 | 5:7,799,276-7,800,313 | - | C1H5g13669 | C2H5g10863 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| CX5g039447 | 5:7,803,945-7,805,201 | - | C1H5g11478 | C2H5g12394 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| CX5g038303 | 5:7,806,994-7,813,661 | + | C1H5g13415 | C2H5g03213 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| CX5g037603 | 5:7,820,176-7,822,873 | + | C1H5g22880 | C2H5g11253 | - | - | - | Detail |
| CX5g040268 | 5:7,821,132-7,826,958 | - | C1H5g03577 | C2H5g17103 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| CX5g037131 | 5:7,828,762-7,829,244 | + | C1H5g15774 | C2H5g27742 | - | Os05g0590100 | - | Detail |