| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g28325 | 11:16,997,543-17,001,740 | - | C1H11g31363 | CX11g012480 | LOC_Os11g32360 | Os11g0526800 | - | Detail |
| C2H11g30464 | 11:17,012,347-17,013,027 | + | - | CX11g012678 | LOC_Os11g32380 | Os11g0527000 | - | Detail |
| C2H11g24046 | 11:17,013,867-17,014,912 | - | - | CX11g013488 | LOC_Os11g32390 | Os11g0527100 | - | Detail |
| C2H11g22361 | 11:17,025,009-17,028,147 | - | C1H11g27567 | CX11g012924 | LOC_Os11g32410 | Os11g0527300 | - | Detail |
| C2H11g00841 | 11:17,041,519-17,044,784 | + | C1H11g04891 | CX11g012165 | LOC_Os11g34610 | Os11g0549300 | - | Detail |
| C2H11g06601 | 11:17,059,055-17,065,884 | + | C1H11g31827 | CX11g012482 | LOC_Os11g32470 | Os11g0528200 | - | Detail |
| C2H11g22543 | 11:17,068,424-17,070,123 | + | C1H11g14657 | CX11g012706 | LOC_Os11g32480 | Os11g0528300 | - | Detail |
| C2H11g05344 | 11:17,070,628-17,075,200 | - | C1H11g30830 | CX11g014779 | LOC_Os11g32490 | Os11g0528400 | - | Detail |
| C2H11g05722 | 11:17,076,266-17,077,460 | - | C1H11g08990 | CX11g013499 | LOC_Os11g32500 | Os11g0528500 | - | Detail |
| C2H11g05273 | 11:17,079,312-17,080,198 | - | C1H11g28681 | CX11g012246 | LOC_Os11g32510 | Os11g0528700 | TLD2 | Detail |
| C2H11g16689 | 11:17,083,713-17,084,645 | - | C1H11g28966 | CX11g012246 | LOC_Os11g32520 | Os11g0528700 | TLD2 | Detail |
| C2H11g08000 | 11:17,084,684-17,085,297 | - | C1H11g21873 | CX11g012246 | LOC_Os11g32520 | Os11g0528700 | TLD2 | Detail |
| C2H11g28508 | 11:17,104,905-17,110,068 | - | C1H11g24198 | CX11g014346 | LOC_Os11g32550 | Os11g0529125 | - | Detail |
| C2H11g29369 | 11:17,115,743-17,116,780 | - | C1H11g24724 | CX11g014378 | LOC_Os11g32580 | Os11g0529500 | - | Detail |
| C2H11g22146 | 11:17,117,499-17,117,711 | - | C1H11g24724 | CX11g014378 | LOC_Os11g32580 | Os11g0529500 | - | Detail |
| C2H11g08938 | 11:17,122,832-17,124,641 | + | C1H11g14507 | CX11g011489 | LOC_Os11g32610 | Os11g0529800 | - | Detail |
| C2H11g10543 | 11:17,127,754-17,129,486 | - | C1H11g01560 | CX11g013006 | LOC_Os11g32620 | Os11g0529100 | - | Detail |
| C2H11g26413 | 11:17,159,439-17,162,844 | - | C1H11g07861 | CX11g013474 | LOC_Os11g32650 | Os11g0530600 | OsCHS1, OsCHS24 | Detail |
| C2H11g21610 | 11:17,185,739-17,189,824 | + | C1H11g20494 | CX11g014879 | LOC_Os11g32720 | Os11g0531300 | - | Detail |
| C2H11g18931 | 11:17,209,616-17,211,931 | + | C1H11g16156 | CX11g013676 | LOC_Os11g32750 | Os11g0531700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039529 | 5:7,631,236-7,632,117 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15880 | Os05g0247800 | OsXIP | Detail |
| CX5g040966 | 5:7,637,959-7,644,799 | - | C1H5g04227 | C2H5g09723 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| CX5g038528 | 5:7,655,589-7,656,482 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15920 | Os05g0248200 | - | Detail |
| CX5g040278 | 5:7,656,900-7,657,077 | + | - | - | - | - | - | Detail |
| CX5g038055 | 5:7,663,141-7,665,000 | - | C1H5g29560 | C2H5g16380 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| CX5g038858 | 5:7,678,393-7,678,704 | - | C1H5g10784 | C2H5g23841 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| CX5g036929 | 5:7,689,346-7,689,852 | + | - | - | - | - | - | Detail |
| CX5g039741 | 5:7,690,376-7,690,663 | + | - | - | LOC_Os12g40930 | Os04g0367800 | - | Detail |
| CX5g039101 | 5:7,702,866-7,718,501 | - | C1H5g23916 | C2H5g02175 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| CX5g041055 | 5:7,730,869-7,733,775 | - | C1H5g19855 | C2H5g11862 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039499 | 5:7,743,530-7,744,219 | - | C1H7g31370 | - | - | - | - | Detail |
| CX5g037269 | 5:7,756,773-7,756,991 | - | - | - | - | Os12g0254601 | - | Detail |
| CX5g041082 | 5:7,760,745-7,766,203 | - | C1H12g04637 | C2H5g08541 | LOC_Os05g16500 | - | - | Detail |
| CX5g038245 | 5:7,769,534-7,773,025 | - | C1H5g18798 | C2H5g10190 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039794 | 5:7,799,276-7,800,313 | - | C1H5g13669 | C2H5g10863 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| CX5g039447 | 5:7,803,945-7,805,201 | - | C1H5g11478 | C2H5g12394 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| CX5g038303 | 5:7,806,994-7,813,661 | + | C1H5g13415 | C2H5g03213 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| CX5g037603 | 5:7,820,176-7,822,873 | + | C1H5g22880 | C2H5g11253 | - | - | - | Detail |
| CX5g040268 | 5:7,821,132-7,826,958 | - | C1H5g03577 | C2H5g17103 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| CX5g037131 | 5:7,828,762-7,829,244 | + | C1H5g15774 | C2H5g27742 | - | Os05g0590100 | - | Detail |