| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g11177 | 7:20,174,274-20,176,244 | - | C2H7g03070 | CX7g046857 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| C1H7g31708 | 7:20,180,689-20,184,505 | - | C2H7g20298 | CX7g050090 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| C1H7g28144 | 7:20,192,547-20,199,198 | + | C2H7g01650 | CX7g046227 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| C1H7g30368 | 7:20,200,325-20,200,915 | - | - | CX7g047062 | LOC_Os07g39790 | Os07g0586600 | - | Detail |
| C1H7g03308 | 7:20,201,336-20,204,346 | - | C2H7g25217 | CX7g049224 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| C1H7g20287 | 7:20,209,722-20,210,492 | - | C2H7g10425 | CX7g049264 | LOC_Os07g39810 | Os07g0586800 | - | Detail |
| C1H7g26123 | 7:20,228,584-20,230,389 | + | C2H7g15547 | CX7g049212 | LOC_Os07g39820 | Os07g0586900 | OsSHR1 | Detail |
| C1H7g04106 | 7:20,245,398-20,247,214 | + | C2H7g30340 | CX7g047969 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| C1H7g17905 | 7:20,248,674-20,251,675 | - | C2H7g05226 | CX7g049988 | - | - | - | Detail |
| C1H7g10975 | 7:20,254,655-20,257,725 | - | C2H7g03999 | CX7g047961 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| C1H7g12981 | 7:20,260,234-20,266,162 | - | C2H7g16477 | CX7g047553 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| C1H7g02974 | 7:20,269,054-20,272,079 | - | C2H7g21246 | CX7g047421 | LOC_Os07g39860 | Os07g0587300 | - | Detail |
| C1H7g21618 | 7:20,272,095-20,273,408 | - | C2H7g09412 | CX7g049856 | LOC_Os07g39870 | Os07g0587400 | - | Detail |
| C1H7g20876 | 7:20,279,050-20,280,720 | + | C2H7g01401 | CX7g049014 | LOC_Os07g39590 | Os07g0587500 | - | Detail |
| C1H7g18991 | 7:20,289,777-20,290,637 | + | C2H7g00832 | CX7g049825 | LOC_Os08g36610 | Os08g0470000 | - | Detail |
| C1H7g01361 | 7:20,290,837-20,291,204 | + | C2H7g10776 | - | - | - | - | Detail |
| C1H7g24204 | 7:20,295,546-20,300,827 | + | C2H7g18878 | CX7g048955 | LOC_Os07g39900 | Os07g0588000 | - | Detail |
| C1H7g31387 | 7:20,295,548-20,295,988 | - | C2H7g07367 | - | - | - | - | Detail |
| C1H7g02347 | 7:20,303,353-20,305,788 | - | C2H7g11193 | CX7g049230 | LOC_Os07g39910 | Os07g0588100 | - | Detail |
| C1H7g29391 | 7:20,311,443-20,317,488 | + | C2H7g03480 | CX7g047625 | LOC_Os07g39920 | Os07g0588200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039529 | 5:7,631,236-7,632,117 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15880 | Os05g0247800 | OsXIP | Detail |
| CX5g040966 | 5:7,637,959-7,644,799 | - | C1H5g04227 | C2H5g09723 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| CX5g038528 | 5:7,655,589-7,656,482 | + | C1H5g21179 | C2H5g03508 | LOC_Os05g15920 | Os05g0248200 | - | Detail |
| CX5g040278 | 5:7,656,900-7,657,077 | + | - | - | - | - | - | Detail |
| CX5g038055 | 5:7,663,141-7,665,000 | - | C1H5g29560 | C2H5g16380 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| CX5g038858 | 5:7,678,393-7,678,704 | - | C1H5g10784 | C2H5g23841 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| CX5g036929 | 5:7,689,346-7,689,852 | + | - | - | - | - | - | Detail |
| CX5g039741 | 5:7,690,376-7,690,663 | + | - | - | LOC_Os12g40930 | Os04g0367800 | - | Detail |
| CX5g039101 | 5:7,702,866-7,718,501 | - | C1H5g23916 | C2H5g02175 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| CX5g041055 | 5:7,730,869-7,733,775 | - | C1H5g19855 | C2H5g11862 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039499 | 5:7,743,530-7,744,219 | - | C1H7g31370 | - | - | - | - | Detail |
| CX5g037269 | 5:7,756,773-7,756,991 | - | - | - | - | Os12g0254601 | - | Detail |
| CX5g041082 | 5:7,760,745-7,766,203 | - | C1H12g04637 | C2H5g08541 | LOC_Os05g16500 | - | - | Detail |
| CX5g038245 | 5:7,769,534-7,773,025 | - | C1H5g18798 | C2H5g10190 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| CX5g039794 | 5:7,799,276-7,800,313 | - | C1H5g13669 | C2H5g10863 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| CX5g039447 | 5:7,803,945-7,805,201 | - | C1H5g11478 | C2H5g12394 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| CX5g038303 | 5:7,806,994-7,813,661 | + | C1H5g13415 | C2H5g03213 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| CX5g037603 | 5:7,820,176-7,822,873 | + | C1H5g22880 | C2H5g11253 | - | - | - | Detail |
| CX5g040268 | 5:7,821,132-7,826,958 | - | C1H5g03577 | C2H5g17103 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| CX5g037131 | 5:7,828,762-7,829,244 | + | C1H5g15774 | C2H5g27742 | - | Os05g0590100 | - | Detail |