| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28847 | 9:14,495,660-14,501,828 | + | C1H9g14790 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| C2H9g06834 | 9:14,527,167-14,527,978 | + | C1H9g30078 | - | LOC_Os09g28520 | Os09g0459200 | SG1, OsSG1 | Detail |
| C2H9g17751 | 9:14,547,384-14,551,872 | - | C1H9g01784 | CX9g056105 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| C2H9g06752 | 9:14,555,807-14,567,696 | + | C1H9g28087 | CX9g057640 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| C2H9g25937 | 9:14,568,988-14,570,284 | - | C1H9g15128 | CX9g055374 | - | Os09g0459900 | - | Detail |
| C2H9g01353 | 9:14,575,563-14,576,426 | + | C1H9g20930 | CX9g056394 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| C2H9g17816 | 9:14,579,147-14,588,717 | + | C1H9g17836 | CX9g055971 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| C2H9g21518 | 9:14,592,660-14,593,598 | + | C1H9g11334 | CX9g055140 | LOC_Os09g28640 | Os09g0460500 | - | Detail |
| C2H9g29988 | 9:14,596,327-14,597,068 | - | - | - | - | - | - | Detail |
| C2H9g26252 | 9:14,598,004-14,598,942 | + | C1H9g08722 | CX9g055140 | LOC_Os09g28650 | Os09g0460700 | - | Detail |
| C2H9g05249 | 9:14,628,687-14,629,661 | - | C1H9g31584 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C2H9g03017 | 9:14,629,957-14,630,593 | - | C1H9g31193 | - | - | Os09g0462301 | - | Detail |
| C2H9g27701 | 9:14,634,127-14,636,646 | + | C1H9g18452 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C2H9g19629 | 9:14,637,145-14,639,254 | + | C1H9g29610 | CX9g056435 | LOC_Os09g28780 | - | - | Detail |
| C2H9g05705 | 9:14,650,276-14,654,133 | + | C1H9g28013 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C2H9g21321 | 9:14,655,361-14,655,770 | + | C1H9g15723 | - | - | Os09g0462850 | - | Detail |
| C2H9g19364 | 9:14,657,776-14,660,369 | - | C1H9g15089 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C2H9g06754 | 9:14,662,217-14,665,042 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C2H9g23768 | 9:14,665,134-14,667,009 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | - | - | Detail |
| C2H9g26932 | 9:14,677,261-14,679,579 | - | C1H9g16758 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003901 | 1:22,036,348-22,036,542 | + | - | - | - | Os01g0617200 | - | Detail |
| CX1g005424 | 1:22,036,628-22,042,334 | - | C1H1g27380 | C2H1g01334 | LOC_Os01g43020 | Os01g0616900 | OsCTPS1 | Detail |
| CX1g003626 | 1:22,051,307-22,051,480 | + | - | - | - | - | - | Detail |
| CX1g006802 | 1:22,052,687-22,052,992 | - | - | - | - | - | - | Detail |
| CX1g007195 | 1:22,072,374-22,085,333 | - | C1H1g02684 | C2H1g12553 | LOC_Os01g43030 | Os01g0617500 | - | Detail |
| CX1g002875 | 1:22,076,100-22,076,426 | + | - | - | - | - | - | Detail |
| CX1g000589 | 1:22,090,926-22,092,290 | - | - | - | LOC_Os01g43040 | Os01g0617600 | - | Detail |
| CX1g006513 | 1:22,097,896-22,098,546 | + | C1H1g06998 | C2H1g19322 | LOC_Os12g27800 | Os01g0894100 | - | Detail |
| CX1g004655 | 1:22,099,110-22,100,041 | + | C1H1g06998 | C2H8g10843 | LOC_Os12g27800 | - | - | Detail |
| CX1g002530 | 1:22,101,621-22,109,957 | + | C1H1g04403 | C2H1g03908 | LOC_Os01g43050 | Os01g0617700 | - | Detail |
| CX1g000604 | 1:22,110,965-22,112,612 | - | C1H1g00516 | C2H1g08569 | LOC_Os01g43060 | Os01g0617800 | - | Detail |
| CX1g004316 | 1:22,114,303-22,116,630 | + | C1H1g09495 | C2H1g01081 | LOC_Os01g43070 | Os01g0617900 | - | Detail |
| CX1g002498 | 1:22,117,091-22,118,026 | - | - | - | LOC_Os01g43080 | Os01g0618000 | - | Detail |
| CX1g005169 | 1:22,120,928-22,121,266 | + | - | C2H6g27200 | - | - | - | Detail |
| CX1g000678 | 1:22,122,165-22,124,462 | - | C1H1g19006 | C2H1g29487 | LOC_Os01g43090 | Os01g0618100 | - | Detail |
| CX1g005980 | 1:22,127,366-22,132,290 | + | C1H1g27169 | C2H1g23236 | LOC_Os01g43100 | Os01g0618200 | - | Detail |
| CX1g006386 | 1:22,139,080-22,142,767 | - | C1H1g02475 | C2H1g25813 | LOC_Os01g43110 | Os01g0618300 | - | Detail |
| CX1g006588 | 1:22,144,792-22,147,890 | + | C1H1g04496 | C2H1g12742 | LOC_Os01g43120 | Os01g0618400 | - | Detail |
| CX1g000664 | 1:22,148,858-22,151,675 | + | C1H1g16334 | C2H1g17892 | LOC_Os01g43130 | Os01g0618500 | - | Detail |
| CX1g003763 | 1:22,158,482-22,161,970 | + | C1H1g15522 | C2H1g09612 | LOC_Os01g43140 | Os01g0618700 | - | Detail |