| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30214 | 3:30,110,176-30,116,405 | - | C1H3g19040 | CX3g026973 | LOC_Os03g57790 | Os03g0791800 | OsRad6 | Detail |
| C2H3g19877 | 3:30,121,830-30,126,985 | + | C1H3g04638 | CX3g031118 | LOC_Os03g57840 | Os03g0792400 | - | Detail |
| C2H3g20217 | 3:30,128,648-30,129,112 | + | C1H3g06972 | CX3g026059 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| C2H3g15262 | 3:30,130,419-30,134,695 | + | C1H3g08271 | CX3g027727 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| C2H3g21443 | 3:30,135,504-30,138,487 | - | C1H3g10930 | CX3g028037 | LOC_Os03g57870 | Os03g0792600 | - | Detail |
| C2H3g25447 | 3:30,143,054-30,146,048 | + | C1H3g25888 | CX3g029236 | LOC_Os03g57880 | Os03g0792800 | OsBGL8 | Detail |
| C2H3g20733 | 3:30,146,755-30,149,386 | - | C1H3g03780 | CX3g030105 | LOC_Os03g57890 | Os03g0792900 | OsSAP6 | Detail |
| C2H3g04800 | 3:30,151,047-30,152,477 | + | C1H3g10181 | - | - | - | - | Detail |
| C2H3g05066 | 3:30,155,573-30,156,320 | - | C1H3g01153 | CX3g031111 | LOC_Os03g57920 | Os03g0793300 | - | Detail |
| C2H3g15687 | 3:30,160,289-30,167,343 | + | C1H3g25262 | CX3g027479 | LOC_Os03g57940 | Os03g0793500 | - | Detail |
| C2H3g19336 | 3:30,170,775-30,175,364 | + | C1H3g03977 | CX3g026412 | LOC_Os03g57950 | Os03g0793600 | - | Detail |
| C2H3g14270 | 3:30,180,531-30,181,182 | + | C1H3g20219 | - | - | - | - | Detail |
| C2H3g20071 | 3:30,181,635-30,183,958 | + | C1H3g10439 | CX3g031262 | LOC_Os03g57960 | Os03g0793700 | OsCDP3.10, qSP3 | Detail |
| C2H3g00562 | 3:30,184,607-30,185,242 | - | C1H3g28172 | CX3g031217 | LOC_Os03g57970 | Os03g0793800 | - | Detail |
| C2H3g09651 | 3:30,187,370-30,188,698 | - | C1H3g24095 | CX3g025005 | LOC_Os03g57980 | Os03g0793900 | - | Detail |
| C2H3g03743 | 3:30,189,217-30,190,209 | + | C1H3g11974 | CX3g031217 | LOC_Os03g57990 | Os03g0794000 | - | Detail |
| C2H3g03085 | 3:30,196,354-30,198,273 | + | C1H3g19227 | CX3g029981 | LOC_Os03g58010 | Os03g0794300 | - | Detail |
| C2H3g06823 | 3:30,199,431-30,202,849 | - | C1H3g26466 | CX3g025037 | LOC_Os03g58040 | Os03g0794500 | - | Detail |
| C2H3g22104 | 3:30,207,113-30,208,580 | - | C1H3g11189 | CX3g029860 | LOC_Os03g58050 | Os03g0794700 | - | Detail |
| C2H3g21984 | 3:30,211,358-30,222,171 | + | C1H3g18133 | CX3g027656 | LOC_Os03g58060 | Os03g0794800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037069 | 5:5,430,476-5,431,795 | - | C1H5g27296 | C2H5g28431 | LOC_Os05g11650 | - | - | Detail |
| CX5g037110 | 5:5,433,887-5,434,060 | + | - | - | - | - | - | Detail |
| CX5g040063 | 5:5,436,933-5,437,100 | + | - | - | - | - | - | Detail |
| CX5g036961 | 5:5,461,456-5,462,643 | + | C1H5g00832 | C2H5g00026 | LOC_Os05g11700 | Os05g0207200 | PPR5 | Detail |
| CX5g040293 | 5:5,463,917-5,465,679 | + | C1H6g25462 | C2H5g21868 | LOC_Os05g11710 | Os05g0207300 | - | Detail |
| CX5g040567 | 5:5,466,270-5,468,932 | - | C1H5g17582 | C2H5g29298 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| CX5g039027 | 5:5,470,534-5,470,683 | + | - | - | - | - | - | Detail |
| CX5g040833 | 5:5,471,839-5,477,884 | - | C1H5g05386 | C2H5g03783 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| CX5g039805 | 5:5,480,900-5,484,907 | - | C1H5g05946 | C2H5g17868 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| CX5g040662 | 5:5,496,206-5,509,010 | + | C1H5g22540 | C2H5g16919 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| CX5g037855 | 5:5,515,570-5,518,967 | + | C1H5g04526 | C2H5g18196 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| CX5g037275 | 5:5,520,199-5,521,617 | - | C1H5g29251 | C2H5g05539 | LOC_Os05g11790 | Os05g0208100 | - | Detail |
| CX5g039127 | 5:5,531,942-5,536,311 | - | C1H5g27460 | C2H5g00233 | LOC_Os05g11810 | Os05g0208550 | - | Detail |
| CX5g038870 | 5:5,549,745-5,555,843 | - | C1H5g07351 | C2H5g13507 | LOC_Os05g11850 | Os05g0209100 | - | Detail |
| CX5g040643 | 5:5,557,944-5,558,348 | + | - | - | - | - | - | Detail |
| CX5g040857 | 5:5,559,659-5,559,982 | + | - | - | - | - | - | Detail |
| CX5g039304 | 5:5,562,100-5,562,882 | - | C1H5g28482 | C2H5g10119 | LOC_Os05g11860 | Os05g0426066 | - | Detail |
| CX5g038086 | 5:5,565,335-5,565,484 | + | - | - | - | - | - | Detail |
| CX5g040486 | 5:5,567,962-5,568,735 | + | C1H5g03790 | C2H5g11847 | LOC_Os05g11870 | Os05g0209400 | - | Detail |
| CX5g039069 | 5:5,572,677-5,573,050 | + | C1H5g13449 | C2H5g12685 | LOC_Os05g11900 | Os05g0209500 | - | Detail |