| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10005 | 3:21,579,075-21,586,255 | + | C1H3g29822 | CX3g030220 | LOC_Os03g42010 | Os03g0616300 | - | Detail |
| C2H3g25190 | 3:21,587,280-21,592,937 | + | C1H3g02131 | CX3g027194 | LOC_Os03g42020 | Os03g0616400 | - | Detail |
| C2H3g04640 | 3:21,596,020-21,601,382 | - | C1H3g04775 | CX3g028407 | LOC_Os03g42040 | Os03g0616500 | - | Detail |
| C2H3g04177 | 3:21,605,904-21,621,533 | - | C1H3g10684 | CX3g025679 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C2H3g24758 | 3:21,657,707-21,659,159 | - | C1H3g02090 | CX3g029365 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| C2H3g20240 | 3:21,687,360-21,691,397 | - | C1H3g25739 | CX3g028127 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| C2H3g19029 | 3:21,703,153-21,705,122 | - | C1H3g17864 | CX3g025773 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| C2H3g03302 | 3:21,741,991-21,747,226 | + | C1H3g03687 | CX3g029634 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| C2H3g27772 | 3:21,749,049-21,751,758 | + | C1H3g26153 | CX3g026756 | LOC_Os03g42230 | Os03g0619600 | - | Detail |
| C2H3g24221 | 3:21,754,951-21,761,688 | + | C1H3g06725 | CX3g025711 | LOC_Os03g42240 | Os03g0619800 | - | Detail |
| C2H3g00057 | 3:21,768,006-21,770,471 | + | C1H3g18743 | CX3g025711 | LOC_Os03g42230 | Os03g0619850 | - | Detail |
| C2H3g18118 | 3:21,779,199-21,780,935 | + | C1H3g14727 | CX3g026756 | LOC_Os03g42280 | Os03g0620400 | - | Detail |
| C2H3g09124 | 3:21,787,740-21,788,734 | + | C1H3g10562 | CX3g026756 | LOC_Os03g42240 | Os03g0620500 | - | Detail |
| C2H3g05492 | 3:21,789,938-21,791,210 | + | C1H3g27023 | CX3g025711 | LOC_Os03g42290 | Os03g0620400 | - | Detail |
| C2H3g20166 | 3:21,796,312-21,798,601 | - | C1H3g12219 | CX3g028574 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| C2H3g29208 | 3:21,814,631-21,816,352 | + | C1H3g22508 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C2H3g02303 | 3:21,822,971-21,826,473 | + | C1H3g22508 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C2H3g25619 | 3:21,833,331-21,838,329 | + | C1H3g04432 | CX3g025711 | LOC_Os03g42370 | Os03g0621600 | - | Detail |
| C2H3g10252 | 3:21,840,549-21,842,513 | + | C1H3g02847 | CX3g025711 | LOC_Os03g42410 | Os03g0621650 | - | Detail |
| C2H3g03230 | 3:21,844,899-21,848,515 | + | C1H3g27507 | CX3g025711 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037069 | 5:5,430,476-5,431,795 | - | C1H5g27296 | C2H5g28431 | LOC_Os05g11650 | - | - | Detail |
| CX5g037110 | 5:5,433,887-5,434,060 | + | - | - | - | - | - | Detail |
| CX5g040063 | 5:5,436,933-5,437,100 | + | - | - | - | - | - | Detail |
| CX5g036961 | 5:5,461,456-5,462,643 | + | C1H5g00832 | C2H5g00026 | LOC_Os05g11700 | Os05g0207200 | PPR5 | Detail |
| CX5g040293 | 5:5,463,917-5,465,679 | + | C1H6g25462 | C2H5g21868 | LOC_Os05g11710 | Os05g0207300 | - | Detail |
| CX5g040567 | 5:5,466,270-5,468,932 | - | C1H5g17582 | C2H5g29298 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| CX5g039027 | 5:5,470,534-5,470,683 | + | - | - | - | - | - | Detail |
| CX5g040833 | 5:5,471,839-5,477,884 | - | C1H5g05386 | C2H5g03783 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| CX5g039805 | 5:5,480,900-5,484,907 | - | C1H5g05946 | C2H5g17868 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| CX5g040662 | 5:5,496,206-5,509,010 | + | C1H5g22540 | C2H5g16919 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| CX5g037855 | 5:5,515,570-5,518,967 | + | C1H5g04526 | C2H5g18196 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| CX5g037275 | 5:5,520,199-5,521,617 | - | C1H5g29251 | C2H5g05539 | LOC_Os05g11790 | Os05g0208100 | - | Detail |
| CX5g039127 | 5:5,531,942-5,536,311 | - | C1H5g27460 | C2H5g00233 | LOC_Os05g11810 | Os05g0208550 | - | Detail |
| CX5g038870 | 5:5,549,745-5,555,843 | - | C1H5g07351 | C2H5g13507 | LOC_Os05g11850 | Os05g0209100 | - | Detail |
| CX5g040643 | 5:5,557,944-5,558,348 | + | - | - | - | - | - | Detail |
| CX5g040857 | 5:5,559,659-5,559,982 | + | - | - | - | - | - | Detail |
| CX5g039304 | 5:5,562,100-5,562,882 | - | C1H5g28482 | C2H5g10119 | LOC_Os05g11860 | Os05g0426066 | - | Detail |
| CX5g038086 | 5:5,565,335-5,565,484 | + | - | - | - | - | - | Detail |
| CX5g040486 | 5:5,567,962-5,568,735 | + | C1H5g03790 | C2H5g11847 | LOC_Os05g11870 | Os05g0209400 | - | Detail |
| CX5g039069 | 5:5,572,677-5,573,050 | + | C1H5g13449 | C2H5g12685 | LOC_Os05g11900 | Os05g0209500 | - | Detail |