| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g29686 | 9:12,283,800-12,285,841 | + | C1H9g14098 | CX9g057499 | - | Os09g0411500 | - | Detail |
| C2H9g24020 | 9:12,289,164-12,291,360 | - | C1H9g15710 | CX9g055887 | LOC_Os09g24530 | Os09g0411650 | - | Detail |
| C2H9g15723 | 9:12,292,714-12,294,723 | - | C1H9g26658 | - | LOC_Os09g24540 | Os09g0411700 | - | Detail |
| C2H9g30013 | 9:12,299,658-12,300,674 | - | C1H9g25817 | CX9g056422 | LOC_Os09g24560 | Os09g0411900 | - | Detail |
| C2H9g02677 | 9:12,305,642-12,309,499 | - | - | - | - | - | - | Detail |
| C2H9g16512 | 9:12,310,817-12,313,589 | - | - | CX9g056752 | - | - | - | Detail |
| C2H9g29693 | 9:12,320,549-12,323,729 | - | C1H9g04539 | CX9g055609 | LOC_Os09g24570 | Os09g0412200 | - | Detail |
| C2H9g24987 | 9:12,357,684-12,358,048 | - | C1H9g24887 | CX9g056335 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| C2H9g22954 | 9:12,367,829-12,369,247 | + | C1H9g25612 | CX9g056498 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| C2H9g30609 | 9:12,375,823-12,380,866 | + | C1H9g10917 | CX9g055582 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| C2H9g23813 | 9:12,381,752-12,384,982 | - | C1H9g25606 | CX9g054861 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| C2H9g23311 | 9:12,385,034-12,389,010 | + | C1H9g01483 | CX9g055611 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| C2H9g07064 | 9:12,392,032-12,394,467 | - | C1H9g27670 | CX9g055527 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| C2H9g21107 | 9:12,395,821-12,397,300 | - | C1H9g13850 | CX9g055730 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| C2H9g10108 | 9:12,398,905-12,403,516 | - | C1H9g31189 | CX9g055962 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| C2H9g16912 | 9:12,417,115-12,421,272 | + | C1H9g25839 | CX9g057257 | LOC_Os09g24710 | Os09g0413700 | - | Detail |
| C2H9g05872 | 9:12,444,326-12,444,674 | + | C1H9g16168 | CX9g055576 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| C2H9g16040 | 9:12,444,717-12,445,469 | + | C1H9g16168 | CX9g055576 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| C2H9g10070 | 9:12,500,678-12,501,849 | + | C1H9g29440 | CX9g057784 | LOC_Os09g24840 | Os09g0414900 | - | Detail |
| C2H9g21296 | 9:12,501,854-12,502,991 | - | C1H9g27618 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037069 | 5:5,430,476-5,431,795 | - | C1H5g27296 | C2H5g28431 | LOC_Os05g11650 | - | - | Detail |
| CX5g037110 | 5:5,433,887-5,434,060 | + | - | - | - | - | - | Detail |
| CX5g040063 | 5:5,436,933-5,437,100 | + | - | - | - | - | - | Detail |
| CX5g036961 | 5:5,461,456-5,462,643 | + | C1H5g00832 | C2H5g00026 | LOC_Os05g11700 | Os05g0207200 | PPR5 | Detail |
| CX5g040293 | 5:5,463,917-5,465,679 | + | C1H6g25462 | C2H5g21868 | LOC_Os05g11710 | Os05g0207300 | - | Detail |
| CX5g040567 | 5:5,466,270-5,468,932 | - | C1H5g17582 | C2H5g29298 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| CX5g039027 | 5:5,470,534-5,470,683 | + | - | - | - | - | - | Detail |
| CX5g040833 | 5:5,471,839-5,477,884 | - | C1H5g05386 | C2H5g03783 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| CX5g039805 | 5:5,480,900-5,484,907 | - | C1H5g05946 | C2H5g17868 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| CX5g040662 | 5:5,496,206-5,509,010 | + | C1H5g22540 | C2H5g16919 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| CX5g037855 | 5:5,515,570-5,518,967 | + | C1H5g04526 | C2H5g18196 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| CX5g037275 | 5:5,520,199-5,521,617 | - | C1H5g29251 | C2H5g05539 | LOC_Os05g11790 | Os05g0208100 | - | Detail |
| CX5g039127 | 5:5,531,942-5,536,311 | - | C1H5g27460 | C2H5g00233 | LOC_Os05g11810 | Os05g0208550 | - | Detail |
| CX5g038870 | 5:5,549,745-5,555,843 | - | C1H5g07351 | C2H5g13507 | LOC_Os05g11850 | Os05g0209100 | - | Detail |
| CX5g040643 | 5:5,557,944-5,558,348 | + | - | - | - | - | - | Detail |
| CX5g040857 | 5:5,559,659-5,559,982 | + | - | - | - | - | - | Detail |
| CX5g039304 | 5:5,562,100-5,562,882 | - | C1H5g28482 | C2H5g10119 | LOC_Os05g11860 | Os05g0426066 | - | Detail |
| CX5g038086 | 5:5,565,335-5,565,484 | + | - | - | - | - | - | Detail |
| CX5g040486 | 5:5,567,962-5,568,735 | + | C1H5g03790 | C2H5g11847 | LOC_Os05g11870 | Os05g0209400 | - | Detail |
| CX5g039069 | 5:5,572,677-5,573,050 | + | C1H5g13449 | C2H5g12685 | LOC_Os05g11900 | Os05g0209500 | - | Detail |