| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g14072 | 7:3,230,992-3,232,240 | - | C2H7g06992 | CX7g047710 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| C1H7g03028 | 7:3,234,051-3,235,794 | + | C2H7g22441 | CX7g050139 | LOC_Os07g07480 | Os07g0170200 | - | Detail |
| C1H7g23823 | 7:3,236,102-3,240,733 | - | C2H7g19147 | CX7g047632 | LOC_Os07g07490 | Os07g0170300 | YTH10 | Detail |
| C1H7g11614 | 7:3,243,714-3,244,652 | - | C2H7g13685 | CX7g048057 | LOC_Os07g07500 | Os07g0170500 | - | Detail |
| C1H7g24798 | 7:3,253,204-3,257,563 | + | C2H7g26640 | CX7g049154 | LOC_Os07g07520 | Os07g0170800 | - | Detail |
| C1H7g24634 | 7:3,268,213-3,269,781 | + | C2H7g19751 | CX7g046745 | LOC_Os07g07540 | Os07g0171100 | OsXb22a | Detail |
| C1H7g06195 | 7:3,270,751-3,274,478 | - | C2H7g02309 | CX7g048847 | LOC_Os07g07550 | Os07g0171200 | - | Detail |
| C1H7g31145 | 7:3,280,573-3,287,069 | + | C2H7g29706 | CX7g049998 | LOC_Os07g07560 | Os07g0171300 | - | Detail |
| C1H7g26306 | 7:3,299,814-3,303,230 | + | C2H7g14506 | CX7g047532 | LOC_Os07g07580 | Os07g0172200 | - | Detail |
| C1H7g14038 | 7:3,309,036-3,312,166 | - | C2H7g26589 | CX7g046091 | LOC_Os07g07610 | Os07g0172500 | - | Detail |
| C1H7g15384 | 7:3,313,005-3,315,605 | - | C2H7g16081 | CX7g047681 | LOC_Os07g07620 | Os07g0172600 | OsSLA4 | Detail |
| C1H7g23957 | 7:3,317,585-3,318,599 | - | C2H7g12745 | CX7g048440 | LOC_Os07g07630 | - | - | Detail |
| C1H7g10408 | 7:3,324,899-3,327,126 | + | C2H7g07270 | CX7g047050 | LOC_Os07g07646 | Os03g0795100 | - | Detail |
| C1H7g05797 | 7:3,328,038-3,333,693 | + | C2H7g02138 | CX7g046232 | LOC_Os07g07654 | Os07g0172900 | - | Detail |
| C1H7g02387 | 7:3,340,921-3,343,844 | - | C2H7g04561 | CX7g047731 | LOC_Os07g07680 | Os07g0173200 | - | Detail |
| C1H7g10426 | 7:3,344,826-3,348,342 | + | C2H7g12974 | - | - | - | - | Detail |
| C1H7g12796 | 7:3,356,657-3,357,088 | + | - | - | - | - | - | Detail |
| C1H7g28770 | 7:3,357,099-3,365,145 | + | C2H7g24659 | CX7g049326 | LOC_Os07g07690 | Os07g0173300 | qCTB7 | Detail |
| C1H7g17950 | 7:3,369,294-3,371,517 | + | C2H7g08656 | CX7g047641 | LOC_Os07g07719 | Os07g0173501 | - | Detail |
| C1H7g09786 | 7:3,378,532-3,379,168 | + | C2H7g02287 | CX7g046457 | LOC_Os07g07790 | Os07g0174400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037069 | 5:5,430,476-5,431,795 | - | C1H5g27296 | C2H5g28431 | LOC_Os05g11650 | - | - | Detail |
| CX5g037110 | 5:5,433,887-5,434,060 | + | - | - | - | - | - | Detail |
| CX5g040063 | 5:5,436,933-5,437,100 | + | - | - | - | - | - | Detail |
| CX5g036961 | 5:5,461,456-5,462,643 | + | C1H5g00832 | C2H5g00026 | LOC_Os05g11700 | Os05g0207200 | PPR5 | Detail |
| CX5g040293 | 5:5,463,917-5,465,679 | + | C1H6g25462 | C2H5g21868 | LOC_Os05g11710 | Os05g0207300 | - | Detail |
| CX5g040567 | 5:5,466,270-5,468,932 | - | C1H5g17582 | C2H5g29298 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| CX5g039027 | 5:5,470,534-5,470,683 | + | - | - | - | - | - | Detail |
| CX5g040833 | 5:5,471,839-5,477,884 | - | C1H5g05386 | C2H5g03783 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| CX5g039805 | 5:5,480,900-5,484,907 | - | C1H5g05946 | C2H5g17868 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| CX5g040662 | 5:5,496,206-5,509,010 | + | C1H5g22540 | C2H5g16919 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| CX5g037855 | 5:5,515,570-5,518,967 | + | C1H5g04526 | C2H5g18196 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| CX5g037275 | 5:5,520,199-5,521,617 | - | C1H5g29251 | C2H5g05539 | LOC_Os05g11790 | Os05g0208100 | - | Detail |
| CX5g039127 | 5:5,531,942-5,536,311 | - | C1H5g27460 | C2H5g00233 | LOC_Os05g11810 | Os05g0208550 | - | Detail |
| CX5g038870 | 5:5,549,745-5,555,843 | - | C1H5g07351 | C2H5g13507 | LOC_Os05g11850 | Os05g0209100 | - | Detail |
| CX5g040643 | 5:5,557,944-5,558,348 | + | - | - | - | - | - | Detail |
| CX5g040857 | 5:5,559,659-5,559,982 | + | - | - | - | - | - | Detail |
| CX5g039304 | 5:5,562,100-5,562,882 | - | C1H5g28482 | C2H5g10119 | LOC_Os05g11860 | Os05g0426066 | - | Detail |
| CX5g038086 | 5:5,565,335-5,565,484 | + | - | - | - | - | - | Detail |
| CX5g040486 | 5:5,567,962-5,568,735 | + | C1H5g03790 | C2H5g11847 | LOC_Os05g11870 | Os05g0209400 | - | Detail |
| CX5g039069 | 5:5,572,677-5,573,050 | + | C1H5g13449 | C2H5g12685 | LOC_Os05g11900 | Os05g0209500 | - | Detail |