| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19411 | 5:20,483,239-20,484,174 | - | C1H5g22952 | CX5g039595 | LOC_Os05g41490 | Os05g0494600 | - | Detail |
| C2H5g09380 | 5:20,492,340-20,492,855 | + | C1H5g26938 | CX5g037664 | LOC_Os05g41500 | Os05g0494700 | - | Detail |
| C2H5g03995 | 5:20,495,130-20,503,626 | + | C1H5g06464 | CX5g039650 | LOC_Os05g41510 | Os05g0494800 | - | Detail |
| C2H5g23505 | 5:20,503,683-20,504,588 | - | C1H5g10924 | CX5g040632 | LOC_Os05g41520 | Os05g0495000 | - | Detail |
| C2H5g03977 | 5:20,507,614-20,511,277 | + | C1H5g24212 | CX5g040499 | LOC_Os05g41530 | Os05g0495100 | - | Detail |
| C2H5g23523 | 5:20,516,562-20,517,236 | - | C1H5g12882 | CX5g041013 | LOC_Os05g41540 | Os05g0495200 | - | Detail |
| C2H5g25673 | 5:20,530,412-20,536,648 | + | C1H5g06979 | CX5g039272 | LOC_Os05g41580 | Os05g0495600 | - | Detail |
| C2H5g22048 | 5:20,539,728-20,542,574 | + | C1H5g15624 | CX5g038287 | LOC_Os05g41590 | Os05g0495700 | - | Detail |
| C2H5g23221 | 5:20,550,045-20,553,607 | + | C1H5g21401 | CX5g040024 | LOC_Os05g41610 | Os05g0495900 | - | Detail |
| C2H5g16652 | 5:20,555,138-20,555,530 | + | C1H5g08153 | CX5g040938 | LOC_Os05g41620 | Os05g0496000 | - | Detail |
| C2H5g16282 | 5:20,556,051-20,556,953 | - | C1H5g29278 | CX5g038168 | LOC_Os05g41630 | Os05g0496100 | - | Detail |
| C2H5g29840 | 5:20,557,967-20,560,423 | - | C1H5g10706 | CX5g039229 | LOC_Os05g41640 | Os05g0496200 | - | Detail |
| C2H5g26906 | 5:20,562,120-20,563,465 | - | C1H5g02490 | CX5g038553 | LOC_Os05g41660 | Os05g0496400 | OsMC4 | Detail |
| C2H5g01565 | 5:20,563,909-20,566,436 | - | C1H5g27054 | CX5g038025 | LOC_Os05g41670 | Os05g0496500 | OsMC5 | Detail |
| C2H5g01213 | 5:20,573,211-20,582,736 | + | C1H5g24401 | CX5g038896 | LOC_Os05g41750 | Os05g0497150 | - | Detail |
| C2H5g03586 | 5:20,584,676-20,585,257 | - | C1H5g15275 | CX5g037356 | LOC_Os05g41760 | Os05g0497200 | ERF130, MFS1, OsERF#130, OsERF130, AP2/EREBP#165, AP2/EREBP165 | Detail |
| C2H5g06109 | 5:20,590,213-20,590,725 | - | C1H5g19097 | - | - | - | - | Detail |
| C2H5g13982 | 5:20,590,726-20,591,217 | - | C1H5g27872 | - | - | - | - | Detail |
| C2H5g05481 | 5:20,597,606-20,598,316 | - | C1H5g20790 | CX5g039606 | LOC_Os05g41780 | Os05g0497300 | OsERF74 | Detail |
| C2H5g00564 | 5:20,618,620-20,623,514 | - | C1H5g01822 | CX5g039317 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039574 | 5:4,738,012-4,738,188 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039459 | 5:4,749,486-4,749,713 | + | - | - | - | Os05g0195901 | - | Detail |
| CX5g038431 | 5:4,752,056-4,752,577 | + | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX5g040174 | 5:4,760,765-4,766,890 | + | C1H5g16616 | C2H5g07854 | LOC_Os05g10730 | Os05g0196100 | - | Detail |
| CX5g040771 | 5:4,767,477-4,769,953 | - | C1H5g20504 | C2H5g20803 | LOC_Os05g10740 | Os05g0196200 | - | Detail |
| CX5g037020 | 5:4,780,551-4,780,781 | - | C1H8g16239 | - | - | - | - | Detail |
| CX5g039020 | 5:4,787,720-4,794,040 | + | C1H5g08645 | C2H5g08170 | LOC_Os05g10770 | Os05g0196500 | JMJ703 | Detail |
| CX5g040750 | 5:4,796,968-4,797,288 | + | - | - | - | - | - | Detail |
| CX5g038530 | 5:4,803,091-4,804,847 | - | C1H5g01781 | C2H5g14684 | LOC_Os05g10780 | Os05g0196600 | - | Detail |
| CX5g041048 | 5:4,812,849-4,813,835 | + | - | - | LOC_Os05g10800 | Os05g0196700 | - | Detail |
| CX5g036775 | 5:4,818,879-4,825,073 | + | C1H5g25112 | C2H5g26735 | LOC_Os05g10810 | Os05g0196800 | OsDGAT1-1 | Detail |
| CX5g037768 | 5:4,832,969-4,833,741 | + | C1H5g03382 | C2H5g21360 | - | Os05g0277500 | - | Detail |
| CX5g039145 | 5:4,840,698-4,840,970 | - | - | - | LOC_Os04g24770 | - | - | Detail |
| CX5g038556 | 5:4,845,508-4,848,255 | - | C1H5g16271 | C2H5g30152 | LOC_Os05g10840 | Os05g0197300 | OsIQM4 | Detail |
| CX5g039094 | 5:4,873,242-4,875,083 | + | C1H5g31896 | C2H5g28718 | LOC_Os05g10900 | Os05g0197900 | - | Detail |
| CX5g040158 | 5:4,882,823-4,883,128 | - | - | - | - | - | - | Detail |
| CX5g040812 | 5:4,888,402-4,892,506 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g10920 | Os05g0198100 | - | Detail |
| CX5g040247 | 5:4,914,819-4,916,108 | - | - | - | - | - | - | Detail |
| CX5g037420 | 5:4,917,442-4,919,970 | + | C1H5g10297 | C2H5g12432 | LOC_Os05g10940 | Os05g0198400 | OsZIP7, OsZIP7a | Detail |
| CX5g038049 | 5:4,933,516-4,933,707 | + | - | - | - | - | - | Detail |