| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040429 | 5:4,390,029-4,390,421 | + | C1H5g18908 | C2H5g21878 | LOC_Os05g09600 | Os05g0188300 | - | Detail |
| CX5g039467 | 5:4,394,983-4,403,269 | + | C1H5g23924 | C2H5g20106 | LOC_Os05g09620 | Os05g0188500 | - | Detail |
| CX5g037834 | 5:4,406,169-4,414,356 | + | C1H5g20831 | C2H5g29497 | LOC_Os05g09630 | Os05g0188600 | - | Detail |
| CX5g036849 | 5:4,416,401-4,417,630 | + | C1H5g31408 | C2H5g17918 | LOC_Os05g09640 | Os05g0188700 | - | Detail |
| CX5g038113 | 5:4,421,864-4,423,092 | + | C1H5g28584 | C2H5g23942 | LOC_Os05g09650 | Os05g0188800 | - | Detail |
| CX5g040777 | 5:4,425,122-4,427,494 | - | C1H5g04541 | C2H5g16237 | LOC_Os05g10210 | Os05g0190500 | - | Detail |
| CX5g039264 | 5:4,439,407-4,440,882 | - | C1H5g30574 | C2H5g26411 | LOC_Os05g09704 | Os05g0189300 | - | Detail |
| CX5g038347 | 5:4,485,508-4,485,927 | + | - | - | - | - | - | Detail |
| CX5g036899 | 5:4,499,630-4,500,926 | - | C1H5g11563 | C2H5g11002 | LOC_Os05g09740 | Os05g0190300 | - | Detail |
| CX5g036921 | 5:4,516,934-4,517,923 | - | C1H5g23723 | C2H5g24249 | LOC_Os05g10210 | Os05g0190500 | - | Detail |
| CX5g036677 | 5:4,543,575-4,545,709 | - | C1H5g00065 | C2H5g20639 | LOC_Os05g10370 | Os05g0192100 | - | Detail |
| CX5g036691 | 5:4,584,866-4,585,267 | + | C1H5g16697 | C2H5g13586 | LOC_Os05g10420 | Os05g0192500 | - | Detail |
| CX5g039478 | 5:4,587,070-4,588,322 | + | - | C2H5g16635 | LOC_Os05g10570 | Os05g0193800 | - | Detail |
| CX5g037567 | 5:4,594,835-4,595,344 | + | C1H5g16697 | C2H5g13586 | LOC_Os05g10420 | Os05g0192500 | - | Detail |
| CX5g039003 | 5:4,606,020-4,606,229 | - | C1H1g14515 | C2H1g23792 | - | - | - | Detail |
| CX5g041003 | 5:4,623,638-4,626,770 | - | C1H5g16419 | C2H5g29277 | LOC_Os05g10620 | Os05g0194500 | - | Detail |
| CX5g038062 | 5:4,630,123-4,634,508 | - | C1H5g00540 | C2H5g23614 | LOC_Os05g10630 | Os05g0194600 | - | Detail |
| CX5g038705 | 5:4,661,962-4,662,165 | - | - | - | - | - | - | Detail |
| CX5g036694 | 5:4,664,178-4,665,992 | + | C1H5g29382 | C2H5g30195 | LOC_Os05g10650 | Os05g0194900 | - | Detail |
| CX5g039790 | 5:4,731,274-4,732,590 | - | C1H5g17361 | C2H5g18199 | LOC_Os05g10690 | Os05g0195700 | - | Detail |