| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01731 | 6:22,938,721-22,951,042 | + | C1H6g20754 | CX6g045240 | LOC_Os06g43760 | Os06g0645400 | - | Detail |
| C2H6g19060 | 6:22,958,758-22,962,340 | - | C1H6g28289 | CX6g044887 | LOC_Os06g43780 | Os06g0645600 | - | Detail |
| C2H6g03809 | 6:22,963,538-22,977,258 | - | C1H6g09143 | CX6g044295 | LOC_Os06g43790 | Os06g0645700 | - | Detail |
| C2H6g16896 | 6:22,978,375-22,980,930 | - | C1H6g02577 | CX6g042731 | LOC_Os06g43800 | Os06g0646000 | - | Detail |
| C2H6g00144 | 6:23,007,540-23,013,374 | + | C1H6g04976 | CX6g042688 | LOC_Os06g43840 | Os06g0646400 | - | Detail |
| C2H6g05559 | 6:23,017,922-23,020,338 | + | C1H6g25984 | CX6g045272 | LOC_Os06g43850 | Os06g0646500 | - | Detail |
| C2H6g16940 | 6:23,021,857-23,024,477 | - | C1H6g26077 | CX6g045626 | LOC_Os06g43860 | Os06g0646600 | HOS59, HOS59S | Detail |
| C2H6g02597 | 6:23,031,532-23,035,222 | - | C1H6g19436 | CX6g045351 | LOC_Os06g43870 | - | - | Detail |
| C2H6g24337 | 6:23,045,473-23,048,768 | - | C1H6g29846 | CX6g042928 | LOC_Os06g43880 | Os06g0646900 | OsHGGT | Detail |
| C2H6g29125 | 6:23,052,328-23,054,115 | + | C1H6g00877 | CX6g042487 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| C2H6g13204 | 6:23,060,189-23,064,493 | + | C1H6g08065 | CX6g041230 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| C2H6g09236 | 6:23,064,769-23,070,371 | - | C1H6g31723 | CX6g041258 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| C2H6g29946 | 6:23,099,382-23,101,931 | - | C1H6g19263 | CX6g043868 | LOC_Os06g43980 | - | - | Detail |
| C2H6g15797 | 6:23,105,916-23,107,291 | - | C1H6g04314 | CX6g041862 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| C2H6g19123 | 6:23,116,876-23,119,310 | + | C1H6g02827 | CX6g043505 | - | Os06g0531600 | - | Detail |
| C2H6g25130 | 6:23,126,596-23,127,989 | - | C1H6g19092 | CX6g041428 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| C2H6g09048 | 6:23,143,335-23,152,171 | + | C1H6g01999 | CX6g042578 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| C2H6g02564 | 6:23,178,530-23,182,815 | + | C1H6g07514 | CX6g041592 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| C2H6g25962 | 6:23,185,002-23,187,647 | - | C1H6g08177 | CX6g042762 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| C2H6g16416 | 6:23,191,220-23,196,018 | - | C1H6g22257 | CX6g041956 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038579 | 5:3,820,484-3,821,159 | - | C1H5g24081 | C2H5g23593 | LOC_Os05g08550 | - | - | Detail |
| CX5g037926 | 5:3,822,020-3,822,196 | - | - | C2H5g22086 | LOC_Os05g08554 | - | - | Detail |
| CX5g037936 | 5:3,826,130-3,828,802 | - | C1H5g28500 | C2H5g19576 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| CX5g037730 | 5:3,835,527-3,835,721 | + | - | - | - | - | - | Detail |
| CX5g039091 | 5:3,838,301-3,838,749 | - | C1H5g30909 | C2H5g23931 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| CX5g038646 | 5:3,838,784-3,839,041 | - | C1H5g11220 | C2H5g20930 | - | Os05g0178600 | - | Detail |
| CX5g038400 | 5:3,859,995-3,862,538 | + | C1H5g28275 | C2H5g20358 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| CX5g039771 | 5:3,867,412-3,869,324 | + | C1H5g03795 | C2H5g18108 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| CX5g036716 | 5:3,880,780-3,881,376 | - | - | - | - | - | - | Detail |
| CX5g037983 | 5:3,903,415-3,904,836 | - | C1H5g19959 | C2H5g17102 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| CX5g039721 | 5:3,931,263-3,933,940 | + | C1H5g21520 | C2H5g23753 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| CX5g039999 | 5:3,935,370-3,936,286 | - | C1H5g28593 | C2H5g27114 | LOC_Os05g08740 | Os05g0179900 | - | Detail |
| CX5g037027 | 5:3,944,256-3,945,836 | + | - | - | - | - | - | Detail |
| CX5g040085 | 5:3,956,200-3,957,393 | - | C1H5g31408 | C2H5g17918 | LOC_Os05g08770 | Os05g0180300 | - | Detail |
| CX5g038350 | 5:3,973,780-3,977,278 | - | C1H5g27830 | C2H5g25802 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| CX5g037875 | 5:3,979,718-3,981,126 | - | C1H5g02747 | C2H5g06685 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| CX5g036876 | 5:3,996,299-4,005,615 | - | C1H5g20076 | C2H5g05984 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| CX5g037205 | 5:4,007,402-4,008,502 | + | C1H5g03323 | C2H5g03050 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| CX5g037851 | 5:4,017,037-4,022,418 | + | C1H5g21276 | C2H5g11956 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| CX5g040764 | 5:4,024,541-4,026,109 | + | C1H5g15251 | C2H5g19880 | LOC_Os05g08850 | Os05g0181200 | - | Detail |