| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15300 | 1:18,093,442-18,093,846 | + | - | - | - | - | - | Detail |
| C2H1g23586 | 1:18,095,488-18,095,906 | + | - | CX7g047100 | - | - | - | Detail |
| C2H1g09191 | 1:18,113,603-18,116,657 | - | C1H1g16984 | CX1g000818 | LOC_Os01g35990 | Os01g0541600 | - | Detail |
| C2H1g09441 | 1:18,131,818-18,133,616 | + | C1H1g24864 | CX1g005180 | LOC_Os01g36070 | Os01g0541800 | SWEET2a | Detail |
| C2H1g12295 | 1:18,134,908-18,142,724 | - | C1H1g16612 | CX1g004838 | LOC_Os01g36080 | Os01g0541900 | - | Detail |
| C2H1g10104 | 1:18,144,478-18,145,418 | - | - | - | - | - | - | Detail |
| C2H1g12577 | 1:18,207,947-18,212,038 | + | C1H1g29888 | CX1g003620 | LOC_Os01g36240 | Os01g0543100 | - | Detail |
| C2H1g02067 | 1:18,225,633-18,227,759 | + | C1H12g01910 | CX12g015955 | LOC_Os11g31790 | Os01g0697250 | - | Detail |
| C2H1g25710 | 1:18,257,935-18,260,296 | + | C1H1g17492 | CX4g035708 | LOC_Os01g36270 | Os01g0214200 | - | Detail |
| C2H1g23295 | 1:18,271,316-18,273,489 | + | C1H1g04460 | CX1g002230 | LOC_Os01g36350 | Os01g0544200 | - | Detail |
| C2H1g06257 | 1:18,275,765-18,280,822 | - | C1H6g00903 | CX1g003226 | LOC_Os08g15600 | - | - | Detail |
| C2H1g21574 | 1:18,308,580-18,309,035 | + | C1H1g30489 | CX1g006076 | - | - | - | Detail |
| C2H1g02661 | 1:18,313,835-18,318,532 | + | C1H1g15732 | CX1g002433 | LOC_Os01g36390 | Os01g0544450 | - | Detail |
| C2H1g03774 | 1:18,366,937-18,368,761 | - | C1H1g17288 | CX1g004563 | LOC_Os01g36460 | Os01g0545100 | Os2R_MYB8 | Detail |
| C2H1g05288 | 1:18,384,968-18,385,652 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g15806 | 1:18,396,129-18,397,426 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g04409 | 1:18,398,309-18,399,526 | - | C1H1g19208 | CX1g002360 | LOC_Os01g36500 | Os01g0545500 | Gnk2RLK-2 | Detail |
| C2H1g26336 | 1:18,422,948-18,425,966 | + | C1H1g19939 | CX1g000063 | LOC_Os01g36550 | Os01g0546000 | - | Detail |
| C2H1g28449 | 1:18,426,593-18,429,452 | - | C1H1g27885 | CX1g004410 | LOC_Os01g36560 | Os01g0546100 | - | Detail |
| C2H1g26658 | 1:18,436,829-18,440,650 | - | C1H1g03906 | CX1g005411 | LOC_Os01g36580 | Os01g0546400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038912 | 5:3,698,167-3,698,559 | + | C1H5g18279 | - | LOC_Os03g38940 | Os03g0586400 | - | Detail |
| CX5g040996 | 5:3,702,493-3,705,433 | + | C1H5g27827 | C2H5g07835 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| CX5g038136 | 5:3,709,694-3,715,199 | - | C1H5g22753 | C2H5g15897 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| CX5g040610 | 5:3,722,441-3,722,809 | - | C1H5g17509 | C2H5g00090 | LOC_Os05g08390 | Os05g0176300 | - | Detail |
| CX5g040050 | 5:3,724,727-3,727,301 | - | C1H5g02275 | C2H5g24531 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| CX5g039063 | 5:3,728,828-3,732,075 | - | C1H5g15996 | C2H5g15763 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| CX5g039906 | 5:3,732,200-3,732,690 | + | C1H5g19736 | C2H5g16673 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| CX5g037064 | 5:3,737,387-3,737,731 | - | - | - | LOC_Os05g09700 | Os05g0176700 | - | Detail |
| CX5g037141 | 5:3,742,117-3,742,476 | - | - | - | - | - | - | Detail |
| CX5g039146 | 5:3,745,752-3,753,725 | - | C1H5g07740 | C2H5g23491 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| CX5g037186 | 5:3,753,821-3,755,213 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08440 | Os05g0177000 | - | Detail |
| CX5g040267 | 5:3,756,809-3,757,981 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g040323 | 5:3,760,651-3,761,624 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g041067 | 5:3,768,876-3,770,051 | - | C1H5g26361 | C2H5g14876 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| CX5g039983 | 5:3,771,775-3,773,415 | - | C1H5g12562 | C2H5g23095 | LOC_Os05g08480 | Os05g0177500 | OsUGT5 | Detail |
| CX5g040475 | 5:3,791,570-3,793,439 | + | C1H5g12562 | C2H5g23095 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| CX5g039674 | 5:3,802,314-3,803,334 | + | C1H5g05273 | C2H5g03109 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039762 | 5:3,814,062-3,815,121 | + | C1H5g05273 | C2H5g19519 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039149 | 5:3,817,085-3,817,405 | + | - | - | - | - | - | Detail |
| CX5g040319 | 5:3,817,940-3,819,753 | - | C1H5g26746 | C2H5g08820 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |