| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05002 | 3:30,799,208-30,801,619 | + | C1H3g05972 | CX3g030524 | LOC_Os03g59100 | Os03g0805700 | - | Detail |
| C2H3g16039 | 3:30,803,176-30,806,569 | + | C1H3g19569 | CX3g030524 | LOC_Os03g59110 | Os03g0805900 | - | Detail |
| C2H3g16313 | 3:30,810,710-30,813,445 | + | C1H3g07939 | CX3g030524 | LOC_Os03g59120 | Os03g0805900 | - | Detail |
| C2H3g13126 | 3:30,813,982-30,817,679 | - | C1H3g06635 | CX3g030941 | LOC_Os03g59160 | Os03g0806400 | - | Detail |
| C2H3g27858 | 3:30,818,748-30,821,803 | + | C1H3g22886 | CX3g027239 | LOC_Os03g59170 | Os03g0806500 | - | Detail |
| C2H3g13367 | 3:30,822,855-30,823,925 | + | C1H3g27480 | CX3g026016 | LOC_Os03g59180 | Os03g0806600 | - | Detail |
| C2H3g13696 | 3:30,845,847-30,846,211 | + | C1H7g05822 | CX3g025205 | LOC_Os03g59210 | Os03g0806800 | - | Detail |
| C2H3g21807 | 3:30,847,354-30,849,118 | + | C1H3g13375 | CX3g026400 | LOC_Os03g59220 | Os03g0806900 | - | Detail |
| C2H3g14008 | 3:30,859,274-30,863,143 | + | C1H3g26885 | CX3g026921 | LOC_Os03g59240 | Os03g0807100 | - | Detail |
| C2H3g07423 | 3:30,864,450-30,866,489 | - | C1H3g11037 | CX3g028660 | LOC_Os03g59250 | Os03g0807200 | OsDUF1639.1 | Detail |
| C2H3g00577 | 3:30,874,937-30,878,164 | - | C1H3g25570 | CX3g025343 | LOC_Os03g59264 | Os03g0832200 | - | Detail |
| C2H3g14894 | 3:30,878,168-30,880,747 | - | C1H3g16706 | CX3g025343 | LOC_Os03g59264 | Os03g0807400 | - | Detail |
| C2H3g04449 | 3:30,883,216-30,883,413 | + | C1H3g08998 | CX3g027491 | LOC_Os03g59280 | Os03g0807500 | - | Detail |
| C2H3g28856 | 3:30,883,798-30,885,915 | + | - | - | - | - | - | Detail |
| C2H3g23454 | 3:30,886,501-30,889,916 | - | C1H3g08149 | CX3g030187 | LOC_Os03g59290 | Os03g0807600 | - | Detail |
| C2H3g28073 | 3:30,897,367-30,899,475 | + | C1H3g21319 | CX3g028893 | LOC_Os03g59300 | Os03g0807700 | - | Detail |
| C2H3g16190 | 3:30,900,921-30,902,538 | + | C1H3g20626 | CX3g030569 | LOC_Os03g59310 | Os03g0807800 | - | Detail |
| C2H3g13799 | 3:30,903,813-30,905,238 | + | C1H3g05345 | CX3g030704 | LOC_Os03g59320 | Os03g0807900 | - | Detail |
| C2H3g07099 | 3:30,909,294-30,911,925 | + | C1H3g05454 | CX3g029953 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| C2H3g27778 | 3:30,912,106-30,918,033 | - | C1H3g31749 | CX3g029274 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038912 | 5:3,698,167-3,698,559 | + | C1H5g18279 | - | LOC_Os03g38940 | Os03g0586400 | - | Detail |
| CX5g040996 | 5:3,702,493-3,705,433 | + | C1H5g27827 | C2H5g07835 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| CX5g038136 | 5:3,709,694-3,715,199 | - | C1H5g22753 | C2H5g15897 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| CX5g040610 | 5:3,722,441-3,722,809 | - | C1H5g17509 | C2H5g00090 | LOC_Os05g08390 | Os05g0176300 | - | Detail |
| CX5g040050 | 5:3,724,727-3,727,301 | - | C1H5g02275 | C2H5g24531 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| CX5g039063 | 5:3,728,828-3,732,075 | - | C1H5g15996 | C2H5g15763 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| CX5g039906 | 5:3,732,200-3,732,690 | + | C1H5g19736 | C2H5g16673 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| CX5g037064 | 5:3,737,387-3,737,731 | - | - | - | LOC_Os05g09700 | Os05g0176700 | - | Detail |
| CX5g037141 | 5:3,742,117-3,742,476 | - | - | - | - | - | - | Detail |
| CX5g039146 | 5:3,745,752-3,753,725 | - | C1H5g07740 | C2H5g23491 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| CX5g037186 | 5:3,753,821-3,755,213 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08440 | Os05g0177000 | - | Detail |
| CX5g040267 | 5:3,756,809-3,757,981 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g040323 | 5:3,760,651-3,761,624 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g041067 | 5:3,768,876-3,770,051 | - | C1H5g26361 | C2H5g14876 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| CX5g039983 | 5:3,771,775-3,773,415 | - | C1H5g12562 | C2H5g23095 | LOC_Os05g08480 | Os05g0177500 | OsUGT5 | Detail |
| CX5g040475 | 5:3,791,570-3,793,439 | + | C1H5g12562 | C2H5g23095 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| CX5g039674 | 5:3,802,314-3,803,334 | + | C1H5g05273 | C2H5g03109 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039762 | 5:3,814,062-3,815,121 | + | C1H5g05273 | C2H5g19519 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039149 | 5:3,817,085-3,817,405 | + | - | - | - | - | - | Detail |
| CX5g040319 | 5:3,817,940-3,819,753 | - | C1H5g26746 | C2H5g08820 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |