| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g24648 | 12:5,086,609-5,086,953 | + | C1H12g04913 | CX12g017407 | LOC_Os12g10820 | Os12g0211000 | - | Detail |
| C2H12g26558 | 12:5,087,445-5,089,477 | + | C1H12g12212 | CX12g017407 | LOC_Os12g10810 | Os12g0211000 | - | Detail |
| C2H12g10269 | 12:5,095,807-5,098,807 | + | C1H12g22331 | CX12g017438 | LOC_Os12g10910 | Os12g0211400 | - | Detail |
| C2H12g12998 | 12:5,101,063-5,101,533 | - | C1H12g03623 | CX12g015302 | LOC_Os12g11930 | Os12g0211500 | - | Detail |
| C2H12g02157 | 12:5,102,092-5,105,139 | - | C1H12g08850 | CX12g015441 | LOC_Os12g11930 | Os12g0215950 | - | Detail |
| C2H12g01684 | 12:5,217,988-5,222,251 | + | C1H12g16830 | - | - | Os12g0216000 | - | Detail |
| C2H12g07554 | 12:5,218,952-5,221,378 | - | C1H12g03768 | CX12g015302 | LOC_Os12g11930 | Os12g0215950 | - | Detail |
| C2H12g05098 | 12:5,239,036-5,240,068 | - | C1H12g06312 | - | - | - | - | Detail |
| C2H12g27099 | 12:5,241,568-5,242,217 | - | C1H12g10311 | - | - | Os12g0220866 | - | Detail |
| C2H12g17336 | 12:5,242,576-5,244,008 | - | C1H12g10827 | - | - | - | - | Detail |
| C2H12g13277 | 12:5,259,311-5,262,013 | - | C1H12g13011 | CX12g018313 | LOC_Os12g11940 | Os12g0221000 | - | Detail |
| C2H12g27036 | 12:5,319,136-5,319,345 | - | C1H12g27034 | CX12g015202 | LOC_Os12g11990 | Os12g0218100 | - | Detail |
| C2H12g10554 | 12:5,353,215-5,356,214 | + | C1H12g28699 | CX12g015654 | LOC_Os12g12010 | Os12g0221700 | - | Detail |
| C2H12g05775 | 12:5,378,055-5,381,002 | + | C1H12g09583 | - | - | - | - | Detail |
| C2H12g20945 | 12:5,406,109-5,409,066 | + | C1H12g26433 | CX12g015591 | LOC_Os12g12130 | Os12g0222900 | - | Detail |
| C2H12g21896 | 12:5,420,245-5,421,870 | + | C1H12g04247 | CX12g015104 | LOC_Os12g12170 | Os12g0223300 | - | Detail |
| C2H12g04690 | 12:5,443,880-5,445,354 | + | C1H12g11389 | CX12g016364 | LOC_Os12g12230 | Os12g0223700 | - | Detail |
| C2H12g20015 | 12:5,452,347-5,456,680 | - | C1H12g11200 | CX12g015147 | LOC_Os12g12260 | Os12g0224000 | - | Detail |
| C2H12g05111 | 12:5,461,576-5,462,620 | - | - | - | - | - | - | Detail |
| C2H12g25147 | 12:5,474,699-5,476,366 | - | C1H12g16489 | CX12g016954 | LOC_Os12g12290 | Os12g0224400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038912 | 5:3,698,167-3,698,559 | + | C1H5g18279 | - | LOC_Os03g38940 | Os03g0586400 | - | Detail |
| CX5g040996 | 5:3,702,493-3,705,433 | + | C1H5g27827 | C2H5g07835 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| CX5g038136 | 5:3,709,694-3,715,199 | - | C1H5g22753 | C2H5g15897 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| CX5g040610 | 5:3,722,441-3,722,809 | - | C1H5g17509 | C2H5g00090 | LOC_Os05g08390 | Os05g0176300 | - | Detail |
| CX5g040050 | 5:3,724,727-3,727,301 | - | C1H5g02275 | C2H5g24531 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| CX5g039063 | 5:3,728,828-3,732,075 | - | C1H5g15996 | C2H5g15763 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| CX5g039906 | 5:3,732,200-3,732,690 | + | C1H5g19736 | C2H5g16673 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| CX5g037064 | 5:3,737,387-3,737,731 | - | - | - | LOC_Os05g09700 | Os05g0176700 | - | Detail |
| CX5g037141 | 5:3,742,117-3,742,476 | - | - | - | - | - | - | Detail |
| CX5g039146 | 5:3,745,752-3,753,725 | - | C1H5g07740 | C2H5g23491 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| CX5g037186 | 5:3,753,821-3,755,213 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08440 | Os05g0177000 | - | Detail |
| CX5g040267 | 5:3,756,809-3,757,981 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g040323 | 5:3,760,651-3,761,624 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g041067 | 5:3,768,876-3,770,051 | - | C1H5g26361 | C2H5g14876 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| CX5g039983 | 5:3,771,775-3,773,415 | - | C1H5g12562 | C2H5g23095 | LOC_Os05g08480 | Os05g0177500 | OsUGT5 | Detail |
| CX5g040475 | 5:3,791,570-3,793,439 | + | C1H5g12562 | C2H5g23095 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| CX5g039674 | 5:3,802,314-3,803,334 | + | C1H5g05273 | C2H5g03109 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039762 | 5:3,814,062-3,815,121 | + | C1H5g05273 | C2H5g19519 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039149 | 5:3,817,085-3,817,405 | + | - | - | - | - | - | Detail |
| CX5g040319 | 5:3,817,940-3,819,753 | - | C1H5g26746 | C2H5g08820 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |