| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19577 | 1:30,487,369-30,491,324 | - | C1H1g02266 | CX1g001838 | LOC_Os01g59560 | Os01g0810600 | - | Detail |
| C2H1g14658 | 1:30,495,550-30,500,422 | - | C1H1g28447 | CX1g001838 | LOC_Os01g59570 | Os01g0810800 | - | Detail |
| C2H1g17675 | 1:30,512,826-30,521,655 | - | C1H1g02266 | CX1g001838 | LOC_Os01g59560 | Os01g0810600 | - | Detail |
| C2H1g17234 | 1:30,525,578-30,530,650 | - | C1H1g13792 | CX1g001838 | LOC_Os01g59570 | Os01g0810800 | - | Detail |
| C2H1g28110 | 1:30,558,463-30,565,104 | - | C1H1g28447 | CX1g001838 | LOC_Os01g59570 | Os01g0810800 | - | Detail |
| C2H1g30646 | 1:30,567,236-30,571,477 | + | C1H1g20172 | CX1g002986 | LOC_Os01g59600 | Os01g0811100 | - | Detail |
| C2H1g15554 | 1:30,577,190-30,578,024 | + | - | - | - | - | - | Detail |
| C2H1g10766 | 1:30,578,579-30,580,789 | + | C1H1g16149 | CX1g000845 | LOC_Os01g59620 | Os01g0811300 | OsSUVH7 | Detail |
| C2H1g16591 | 1:30,582,361-30,586,700 | - | C1H1g17620 | CX1g002055 | LOC_Os01g59630 | Os01g0811400 | - | Detail |
| C2H1g20004 | 1:30,587,503-30,589,848 | - | C1H1g10539 | CX1g000306 | LOC_Os01g59640 | Os01g0816100 | OsNAC4 | Detail |
| C2H1g07229 | 1:30,605,633-30,609,938 | + | C1H1g07416 | CX1g005819 | LOC_Os01g59660 | Os01g0812000 | - | Detail |
| C2H1g19546 | 1:30,611,465-30,618,191 | + | C1H1g26167 | CX1g000825 | LOC_Os01g59670 | Os01g0812050 | - | Detail |
| C2H1g07662 | 1:30,620,420-30,621,343 | + | C1H1g24822 | CX1g002345 | LOC_Os01g59680 | Os01g0812100 | - | Detail |
| C2H1g22698 | 1:30,627,442-30,629,468 | + | C1H1g23884 | CX1g002899 | LOC_Os01g59690 | Os01g0812200 | - | Detail |
| C2H1g07290 | 1:30,637,011-30,638,301 | + | C1H1g23641 | CX1g005124 | LOC_Os01g59710 | Os01g0812600 | - | Detail |
| C2H1g18771 | 1:30,639,838-30,641,065 | - | C1H1g10884 | CX1g003076 | LOC_Os01g59720 | Os01g0812600 | - | Detail |
| C2H1g30328 | 1:30,641,500-30,646,439 | - | C1H1g19323 | CX1g002820 | LOC_Os01g59730 | Os01g0812850 | - | Detail |
| C2H1g21230 | 1:30,652,758-30,656,099 | - | C1H1g17016 | CX1g006047 | LOC_Os01g59750 | Os01g0813000 | - | Detail |
| C2H1g04410 | 1:30,657,570-30,660,455 | - | C1H1g16752 | CX1g004048 | LOC_Os01g59760 | Os01g0813100 | HBF2, OsbZIP9 | Detail |
| C2H1g03526 | 1:30,674,816-30,676,664 | + | C1H1g17816 | CX1g000504 | LOC_Os01g67410 | Os01g0813300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038912 | 5:3,698,167-3,698,559 | + | C1H5g18279 | - | LOC_Os03g38940 | Os03g0586400 | - | Detail |
| CX5g040996 | 5:3,702,493-3,705,433 | + | C1H5g27827 | C2H5g07835 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| CX5g038136 | 5:3,709,694-3,715,199 | - | C1H5g22753 | C2H5g15897 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| CX5g040610 | 5:3,722,441-3,722,809 | - | C1H5g17509 | C2H5g00090 | LOC_Os05g08390 | Os05g0176300 | - | Detail |
| CX5g040050 | 5:3,724,727-3,727,301 | - | C1H5g02275 | C2H5g24531 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| CX5g039063 | 5:3,728,828-3,732,075 | - | C1H5g15996 | C2H5g15763 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| CX5g039906 | 5:3,732,200-3,732,690 | + | C1H5g19736 | C2H5g16673 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| CX5g037064 | 5:3,737,387-3,737,731 | - | - | - | LOC_Os05g09700 | Os05g0176700 | - | Detail |
| CX5g037141 | 5:3,742,117-3,742,476 | - | - | - | - | - | - | Detail |
| CX5g039146 | 5:3,745,752-3,753,725 | - | C1H5g07740 | C2H5g23491 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| CX5g037186 | 5:3,753,821-3,755,213 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08440 | Os05g0177000 | - | Detail |
| CX5g040267 | 5:3,756,809-3,757,981 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g040323 | 5:3,760,651-3,761,624 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g041067 | 5:3,768,876-3,770,051 | - | C1H5g26361 | C2H5g14876 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| CX5g039983 | 5:3,771,775-3,773,415 | - | C1H5g12562 | C2H5g23095 | LOC_Os05g08480 | Os05g0177500 | OsUGT5 | Detail |
| CX5g040475 | 5:3,791,570-3,793,439 | + | C1H5g12562 | C2H5g23095 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| CX5g039674 | 5:3,802,314-3,803,334 | + | C1H5g05273 | C2H5g03109 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039762 | 5:3,814,062-3,815,121 | + | C1H5g05273 | C2H5g19519 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039149 | 5:3,817,085-3,817,405 | + | - | - | - | - | - | Detail |
| CX5g040319 | 5:3,817,940-3,819,753 | - | C1H5g26746 | C2H5g08820 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |