| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g02406 | 6:27,240,822-27,243,507 | + | C1H6g12891 | CX6g044390 | LOC_Os06g51420 | Os06g0730800 | - | Detail |
| C2H6g15530 | 6:27,244,514-27,249,801 | + | C1H6g28622 | CX6g045534 | LOC_Os06g51430 | Os06g0730900 | - | Detail |
| C2H6g05585 | 6:27,250,503-27,251,141 | + | C1H6g13214 | - | LOC_Os06g51440 | - | - | Detail |
| C2H6g13832 | 6:27,254,465-27,261,999 | - | C1H6g12188 | CX6g042150 | LOC_Os06g51450 | Os06g0731100 | - | Detail |
| C2H6g10366 | 6:27,262,414-27,262,719 | - | C1H6g09799 | CX6g041800 | LOC_Os11g22350 | Os11g0416900 | - | Detail |
| C2H6g06865 | 6:27,262,769-27,265,154 | - | C1H6g09799 | CX6g041800 | LOC_Os06g51460 | Os06g0731200 | - | Detail |
| C2H6g19425 | 6:27,265,716-27,267,359 | - | C1H6g09799 | CX6g041800 | LOC_Os06g51460 | Os06g0731200 | - | Detail |
| C2H6g30273 | 6:27,269,234-27,272,187 | - | C1H6g24296 | CX6g042125 | LOC_Os06g51470 | Os06g0731300 | - | Detail |
| C2H6g29416 | 6:27,273,911-27,276,280 | + | C1H6g11768 | CX6g043131 | LOC_Os06g51480 | Os06g0731400 | - | Detail |
| C2H6g13457 | 6:27,275,940-27,296,170 | - | C1H6g20539 | CX6g043410 | LOC_Os06g51500 | Os06g0731700 | - | Detail |
| C2H6g16231 | 6:27,297,719-27,300,690 | - | C1H6g07471 | CX6g043566 | LOC_Os06g51510 | Os06g0731800 | - | Detail |
| C2H6g08297 | 6:27,301,682-27,307,271 | + | C1H6g22992 | CX6g041312 | LOC_Os06g51520 | Os06g0731900 | - | Detail |
| C2H6g27110 | 6:27,306,413-27,316,627 | - | C1H6g06327 | CX6g045703 | LOC_Os06g51530 | Os06g0731950 | - | Detail |
| C2H7g16450 | 7:42,581-43,537 | - | C1H10g01786 | CX7g048063 | LOC_Os07g01020 | Os07g0100200 | OsPDX1.1 | Detail |
| C2H7g27452 | 7:48,144-52,081 | + | C1H7g25441 | CX7g046291 | LOC_Os07g01030 | Os07g0100300 | - | Detail |
| C2H7g08425 | 7:53,580-59,845 | + | C1H7g03348 | CX7g048072 | LOC_Os07g01060 | Os07g0100500 | - | Detail |
| C2H7g10961 | 7:60,177-61,901 | + | C1H7g20895 | CX7g047094 | LOC_Os07g01070 | Os07g0100600 | - | Detail |
| C2H7g06519 | 7:65,098-69,300 | - | C1H7g21660 | CX7g049424 | LOC_Os07g01090 | Os07g0100800 | OsProT3 | Detail |
| C2H7g12407 | 7:72,968-73,879 | - | C1H7g08235 | CX7g049864 | LOC_Os07g01100 | Os07g0100900 | - | Detail |
| C2H7g26404 | 7:74,589-76,409 | - | C1H7g10223 | CX7g050056 | LOC_Os07g01110 | Os07g0101000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038912 | 5:3,698,167-3,698,559 | + | C1H5g18279 | - | LOC_Os03g38940 | Os03g0586400 | - | Detail |
| CX5g040996 | 5:3,702,493-3,705,433 | + | C1H5g27827 | C2H5g07835 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| CX5g038136 | 5:3,709,694-3,715,199 | - | C1H5g22753 | C2H5g15897 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| CX5g040610 | 5:3,722,441-3,722,809 | - | C1H5g17509 | C2H5g00090 | LOC_Os05g08390 | Os05g0176300 | - | Detail |
| CX5g040050 | 5:3,724,727-3,727,301 | - | C1H5g02275 | C2H5g24531 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| CX5g039063 | 5:3,728,828-3,732,075 | - | C1H5g15996 | C2H5g15763 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| CX5g039906 | 5:3,732,200-3,732,690 | + | C1H5g19736 | C2H5g16673 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| CX5g037064 | 5:3,737,387-3,737,731 | - | - | - | LOC_Os05g09700 | Os05g0176700 | - | Detail |
| CX5g037141 | 5:3,742,117-3,742,476 | - | - | - | - | - | - | Detail |
| CX5g039146 | 5:3,745,752-3,753,725 | - | C1H5g07740 | C2H5g23491 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| CX5g037186 | 5:3,753,821-3,755,213 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08440 | Os05g0177000 | - | Detail |
| CX5g040267 | 5:3,756,809-3,757,981 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g040323 | 5:3,760,651-3,761,624 | + | C1H5g26361 | C2H5g22969 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| CX5g041067 | 5:3,768,876-3,770,051 | - | C1H5g26361 | C2H5g14876 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| CX5g039983 | 5:3,771,775-3,773,415 | - | C1H5g12562 | C2H5g23095 | LOC_Os05g08480 | Os05g0177500 | OsUGT5 | Detail |
| CX5g040475 | 5:3,791,570-3,793,439 | + | C1H5g12562 | C2H5g23095 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| CX5g039674 | 5:3,802,314-3,803,334 | + | C1H5g05273 | C2H5g03109 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039762 | 5:3,814,062-3,815,121 | + | C1H5g05273 | C2H5g19519 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| CX5g039149 | 5:3,817,085-3,817,405 | + | - | - | - | - | - | Detail |
| CX5g040319 | 5:3,817,940-3,819,753 | - | C1H5g26746 | C2H5g08820 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |