| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02659 | 2:21,650,013-21,652,314 | + | C1H2g31252 | CX2g021015 | LOC_Os02g38040 | Os02g0593600 | OsIRL2 | Detail |
| C2H2g02107 | 2:21,652,904-21,658,629 | - | C1H2g28738 | CX2g022113 | LOC_Os02g38050 | Os02g0593700 | - | Detail |
| C2H2g27414 | 2:21,662,462-21,666,899 | + | C1H2g05228 | CX2g022962 | LOC_Os02g38060 | Os02g0593900 | - | Detail |
| C2H2g28617 | 2:21,671,276-21,676,533 | + | C1H2g19613 | CX2g020918 | LOC_Os02g38080 | Os02g0594100 | - | Detail |
| C2H2g22920 | 2:21,706,647-21,709,519 | + | C1H2g26025 | CX2g022653 | LOC_Os02g38120 | Os02g0594700 | OsBTBN3 | Detail |
| C2H2g27568 | 2:21,725,819-21,728,861 | - | C1H2g03331 | CX2g023488 | LOC_Os02g38130 | Os02g0594800 | An-4, OsSGL | Detail |
| C2H2g08333 | 2:21,734,849-21,737,047 | - | C1H2g12247 | CX2g020733 | LOC_Os02g38160 | Os02g0594900 | - | Detail |
| C2H2g24282 | 2:21,748,043-21,751,282 | - | C1H2g09203 | CX2g024257 | LOC_Os02g38160 | Os02g0595100 | - | Detail |
| C2H2g12684 | 2:21,768,658-21,769,571 | - | C1H2g18043 | CX2g021227 | LOC_Os02g38180 | Os02g0595300 | - | Detail |
| C2H2g27779 | 2:21,773,593-21,777,440 | - | C1H2g28766 | CX2g023998 | LOC_Os02g38200 | Os02g0595500 | - | Detail |
| C2H2g13918 | 2:21,783,398-21,787,026 | + | C1H2g15529 | CX2g023123 | LOC_Os02g38220 | Os02g0595800 | - | Detail |
| C2H2g12990 | 2:21,788,231-21,789,893 | - | C1H2g13753 | CX2g024625 | LOC_Os02g38230 | Os02g0595900 | NAR2.1, OsNAR2.1, OsNRT3.1A | Detail |
| C2H2g05640 | 2:21,794,766-21,797,513 | - | C1H2g12816 | CX2g021096 | LOC_Os02g38240 | Os02g0596000 | - | Detail |
| C2H2g05424 | 2:21,799,545-21,808,652 | - | C1H2g21293 | CX2g020732 | LOC_Os02g38250 | Os02g0596100 | - | Detail |
| C2H2g17152 | 2:21,810,292-21,812,161 | + | C1H2g16769 | CX2g020902 | LOC_Os02g38260 | Os02g0596200 | LSSR1 | Detail |
| C2H2g16801 | 2:21,813,661-21,815,350 | - | C1H2g16904 | - | - | - | - | Detail |
| C2H2g06504 | 2:21,815,761-21,817,377 | - | C1H2g00956 | CX2g024363 | LOC_Os02g38290 | Os02g0596300 | CYP94E1, OsCYP94E1 | Detail |
| C2H2g01473 | 2:21,820,091-21,820,710 | - | - | - | - | - | - | Detail |
| C2H2g22627 | 2:21,823,310-21,826,480 | - | C1H2g15841 | CX2g024642 | LOC_Os02g38300 | Os02g0596500 | - | Detail |
| C2H2g25090 | 2:21,827,821-21,828,330 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038927 | 5:3,554,829-3,558,344 | + | C1H5g01607 | C2H5g20519 | LOC_Os01g07560 | Os05g0169600 | - | Detail |
| CX5g038606 | 5:3,560,310-3,565,015 | - | C1H5g30978 | C2H5g27992 | LOC_Os01g07570 | Os05g0169800 | - | Detail |
| CX5g037959 | 5:3,570,909-3,575,301 | - | C1H5g10105 | C2H5g25368 | LOC_Os05g07790 | Os05g0170000 | - | Detail |
| CX5g038051 | 5:3,579,010-3,581,578 | + | C1H5g15564 | C2H5g03494 | LOC_Os01g07590 | Os05g0170200 | - | Detail |
| CX5g038227 | 5:3,588,055-3,591,033 | + | C1H5g15948 | C2H5g13404 | LOC_Os01g07630 | Os05g0491400 | - | Detail |
| CX5g037694 | 5:3,592,505-3,592,672 | - | - | - | - | - | - | Detail |
| CX5g038454 | 5:3,593,715-3,593,891 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040035 | 5:3,600,801-3,601,157 | - | C1H5g31806 | - | LOC_Os01g07620 | Os05g0170600 | - | Detail |
| CX5g040501 | 5:3,606,004-3,614,552 | - | C1H5g14028 | C2H5g29301 | LOC_Os01g07630 | Os05g0170700 | - | Detail |
| CX5g040737 | 5:3,617,833-3,620,657 | - | C1H5g25530 | C2H5g11350 | LOC_Os05g07860 | Os05g0170800 | - | Detail |
| CX5g038689 | 5:3,622,925-3,625,187 | + | C1H5g29779 | C2H5g30238 | LOC_Os01g07730 | Os05g0170950 | - | Detail |
| CX5g039607 | 5:3,626,596-3,629,049 | - | C1H5g04674 | C2H5g16956 | LOC_Os01g07760 | Os05g0171000 | - | Detail |
| CX5g039717 | 5:3,631,583-3,632,207 | + | C1H5g11504 | C2H5g21158 | LOC_Os01g07780 | Os05g0171200 | - | Detail |
| CX5g038572 | 5:3,635,878-3,638,754 | + | C1H5g14842 | C2H5g11975 | LOC_Os05g07900 | Os05g0171300 | - | Detail |
| CX5g040454 | 5:3,651,324-3,655,424 | + | C1H5g05810 | C2H5g28875 | LOC_Os01g07850 | Os05g0171900 | - | Detail |
| CX5g040186 | 5:3,657,043-3,657,315 | - | - | - | - | Os05g0172000 | - | Detail |
| CX5g040831 | 5:3,661,038-3,665,470 | - | C1H5g06487 | C2H5g23308 | LOC_Os05g08460 | Os05g0172100 | - | Detail |
| CX5g037090 | 5:3,669,419-3,672,589 | - | C1H5g28743 | C2H5g03657 | LOC_Os05g07980 | Os05g0172300 | - | Detail |
| CX5g038351 | 5:3,678,259-3,682,184 | - | C1H5g08333 | C2H5g01713 | LOC_Os05g08460 | Os05g0172500 | - | Detail |
| CX5g040602 | 5:3,690,734-3,691,256 | + | C1H5g05296 | C2H5g08054 | - | Os05g0429100 | - | Detail |