| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17371 | 2:25,847,420-25,848,118 | + | C2H2g19834 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C1H2g00614 | 2:25,856,212-25,857,291 | - | C2H2g12350 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C1H2g03932 | 2:25,866,185-25,869,908 | - | C2H2g27051 | CX2g020860 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| C1H2g09273 | 2:25,873,513-25,878,112 | + | C2H2g04078 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C1H2g23248 | 2:25,878,364-25,879,010 | - | C2H2g07890 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C1H2g07518 | 2:25,883,906-25,884,217 | - | C2H2g23208 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C1H2g17890 | 2:25,884,777-25,887,874 | + | C2H2g03417 | CX2g023866 | LOC_Os02g45950 | - | - | Detail |
| C1H2g27881 | 2:25,888,496-25,889,416 | + | C2H2g24497 | CX2g019320 | - | - | - | Detail |
| C1H2g13117 | 2:25,894,999-25,895,906 | - | - | - | - | - | - | Detail |
| C1H2g27343 | 2:25,896,349-25,902,473 | + | C2H2g17403 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C1H2g11465 | 2:25,905,281-25,907,338 | + | C2H2g07817 | CX2g024528 | LOC_Os02g34860 | Os02g0117400 | - | Detail |
| C1H2g12344 | 2:25,909,079-25,910,160 | + | C2H7g03122 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H2g24305 | 2:25,912,920-25,915,548 | - | C2H2g27686 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C1H2g27920 | 2:25,926,682-25,929,229 | - | C2H2g27892 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C1H2g28250 | 2:25,931,714-25,936,860 | + | C2H2g03411 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C1H2g04547 | 2:25,949,272-25,953,342 | - | C2H2g06457 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C1H2g29736 | 2:25,953,694-25,958,766 | + | C2H2g09278 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C1H2g13130 | 2:25,961,734-25,962,164 | + | C2H2g01630 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C1H2g25245 | 2:25,963,062-25,967,242 | - | C2H2g28721 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C1H2g26309 | 2:25,974,048-25,974,414 | - | C2H2g18789 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038927 | 5:3,554,829-3,558,344 | + | C1H5g01607 | C2H5g20519 | LOC_Os01g07560 | Os05g0169600 | - | Detail |
| CX5g038606 | 5:3,560,310-3,565,015 | - | C1H5g30978 | C2H5g27992 | LOC_Os01g07570 | Os05g0169800 | - | Detail |
| CX5g037959 | 5:3,570,909-3,575,301 | - | C1H5g10105 | C2H5g25368 | LOC_Os05g07790 | Os05g0170000 | - | Detail |
| CX5g038051 | 5:3,579,010-3,581,578 | + | C1H5g15564 | C2H5g03494 | LOC_Os01g07590 | Os05g0170200 | - | Detail |
| CX5g038227 | 5:3,588,055-3,591,033 | + | C1H5g15948 | C2H5g13404 | LOC_Os01g07630 | Os05g0491400 | - | Detail |
| CX5g037694 | 5:3,592,505-3,592,672 | - | - | - | - | - | - | Detail |
| CX5g038454 | 5:3,593,715-3,593,891 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040035 | 5:3,600,801-3,601,157 | - | C1H5g31806 | - | LOC_Os01g07620 | Os05g0170600 | - | Detail |
| CX5g040501 | 5:3,606,004-3,614,552 | - | C1H5g14028 | C2H5g29301 | LOC_Os01g07630 | Os05g0170700 | - | Detail |
| CX5g040737 | 5:3,617,833-3,620,657 | - | C1H5g25530 | C2H5g11350 | LOC_Os05g07860 | Os05g0170800 | - | Detail |
| CX5g038689 | 5:3,622,925-3,625,187 | + | C1H5g29779 | C2H5g30238 | LOC_Os01g07730 | Os05g0170950 | - | Detail |
| CX5g039607 | 5:3,626,596-3,629,049 | - | C1H5g04674 | C2H5g16956 | LOC_Os01g07760 | Os05g0171000 | - | Detail |
| CX5g039717 | 5:3,631,583-3,632,207 | + | C1H5g11504 | C2H5g21158 | LOC_Os01g07780 | Os05g0171200 | - | Detail |
| CX5g038572 | 5:3,635,878-3,638,754 | + | C1H5g14842 | C2H5g11975 | LOC_Os05g07900 | Os05g0171300 | - | Detail |
| CX5g040454 | 5:3,651,324-3,655,424 | + | C1H5g05810 | C2H5g28875 | LOC_Os01g07850 | Os05g0171900 | - | Detail |
| CX5g040186 | 5:3,657,043-3,657,315 | - | - | - | - | Os05g0172000 | - | Detail |
| CX5g040831 | 5:3,661,038-3,665,470 | - | C1H5g06487 | C2H5g23308 | LOC_Os05g08460 | Os05g0172100 | - | Detail |
| CX5g037090 | 5:3,669,419-3,672,589 | - | C1H5g28743 | C2H5g03657 | LOC_Os05g07980 | Os05g0172300 | - | Detail |
| CX5g038351 | 5:3,678,259-3,682,184 | - | C1H5g08333 | C2H5g01713 | LOC_Os05g08460 | Os05g0172500 | - | Detail |
| CX5g040602 | 5:3,690,734-3,691,256 | + | C1H5g05296 | C2H5g08054 | - | Os05g0429100 | - | Detail |