| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26986 | 12:13,868,852-13,872,363 | - | C1H12g01168 | CX12g017787 | LOC_Os12g26940 | Os12g0454800 | CRL4, CHARK, S/T kinase, OsCRL4, OsHKL1, OsCDP | Detail |
| C2H12g26277 | 12:13,877,098-13,877,376 | + | C1H12g10028 | CX12g016039 | - | - | - | Detail |
| C2H12g14469 | 12:13,883,176-13,883,463 | + | - | CX12g015279 | - | - | - | Detail |
| C2H12g20253 | 12:13,923,564-13,926,914 | + | C1H12g23121 | CX12g017975 | LOC_Os12g27060 | Os12g0456100 | - | Detail |
| C2H12g20046 | 12:13,933,284-13,935,699 | - | C1H12g22119 | CX12g016746 | LOC_Os12g27070 | Os12g0456200 | - | Detail |
| C2H12g00613 | 12:13,941,227-13,942,524 | + | C1H12g04965 | CX12g016453 | LOC_Os12g27090 | - | - | Detail |
| C2H12g27509 | 12:13,944,888-13,949,711 | + | C1H12g13521 | CX12g016453 | LOC_Os12g27090 | Os12g0456400 | - | Detail |
| C2H12g10115 | 12:13,959,959-13,960,153 | + | C1H12g25831 | CX12g016959 | LOC_Os12g27190 | Os12g0457200 | - | Detail |
| C2H12g15729 | 12:13,965,338-13,966,053 | - | C1H12g02272 | CX12g018094 | LOC_Os12g27220 | Os12g0458100 | - | Detail |
| C2H12g06376 | 12:13,985,180-13,990,362 | - | C1H12g18821 | CX12g018094 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| C2H12g20196 | 12:14,039,231-14,041,613 | - | C1H12g15735 | CX12g016893 | LOC_Os12g27350 | Os12g0459100 | - | Detail |
| C2H12g17708 | 12:14,082,641-14,091,586 | + | C1H12g04555 | CX12g017463 | LOC_Os12g26870 | Os12g0539700 | - | Detail |
| C2H12g01706 | 12:14,125,247-14,125,945 | + | C1H12g05201 | CX12g017942 | LOC_Os12g27440 | Os12g0460100 | - | Detail |
| C2H12g06459 | 12:14,164,936-14,165,628 | + | C1H12g24783 | CX12g018706 | LOC_Os12g27470 | Os12g0460400 | - | Detail |
| C2H12g17065 | 12:14,187,297-14,190,636 | - | C1H12g15830 | CX12g016743 | LOC_Os12g27520 | Os12g0460800 | - | Detail |
| C2H12g17820 | 12:14,218,232-14,220,063 | - | - | - | - | - | - | Detail |
| C2H12g15845 | 12:14,293,814-14,294,248 | + | C1H12g21553 | CX12g015222 | - | Os12g0461050 | - | Detail |
| C2H12g06780 | 12:14,337,541-14,338,884 | + | - | CX12g015743 | LOC_Os12g27690 | Os12g0462700 | - | Detail |
| C2H12g13285 | 12:14,354,156-14,355,628 | + | C1H12g17942 | CX12g015075 | LOC_Os12g27760 | Os12g0464300 | - | Detail |
| C2H12g13517 | 12:14,380,631-14,382,019 | + | C1H12g24196 | CX12g015075 | LOC_Os12g27810 | Os12g0464300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006583 | 1:21,905,655-21,911,714 | - | C1H1g21693 | C2H1g08375 | LOC_Os01g42800 | Os01g0613900 | - | Detail |
| CX1g005988 | 1:21,913,580-21,917,206 | + | C1H1g30142 | C2H1g30219 | LOC_Os01g42810 | Os01g0614300 | - | Detail |
| CX1g003302 | 1:21,920,025-21,921,365 | - | C1H1g20243 | C2H1g12066 | LOC_Os01g42820 | Os01g0614500 | - | Detail |
| CX1g001445 | 1:21,925,331-21,929,324 | + | C1H1g30904 | C2H1g29942 | LOC_Os01g42830 | Os01g0614700 | - | Detail |
| CX1g001663 | 1:21,930,449-21,936,129 | - | C1H1g01885 | C2H1g10991 | LOC_Os01g42850 | Os01g0614900 | - | Detail |
| CX1g001637 | 1:21,936,646-21,936,939 | + | - | - | - | Os01g0615000 | - | Detail |
| CX1g001822 | 1:21,940,050-21,940,253 | - | C1H1g14641 | C2H1g28283 | LOC_Os01g42860 | Os01g0615050 | OCPI1 | Detail |
| CX1g001917 | 1:21,943,692-21,943,973 | - | - | - | - | - | - | Detail |
| CX1g000364 | 1:21,944,257-21,944,532 | + | - | - | - | - | - | Detail |
| CX1g002212 | 1:21,945,836-21,947,313 | - | C1H1g14133 | C2H1g18656 | LOC_Os01g42870 | Os01g0615200 | - | Detail |
| CX1g004428 | 1:21,948,559-21,950,856 | - | C1H1g10409 | C2H1g17016 | LOC_Os01g42880 | Os01g0615300 | - | Detail |
| CX1g007035 | 1:21,951,750-21,952,925 | - | - | - | - | - | - | Detail |
| CX1g007211 | 1:21,960,318-21,962,159 | - | C1H1g13267 | C2H1g10771 | LOC_Os01g42900 | Os01g0615500 | - | Detail |
| CX1g004400 | 1:21,974,646-21,974,798 | - | - | - | - | - | - | Detail |
| CX1g005260 | 1:21,975,873-21,983,359 | + | C1H1g29477 | C2H1g28413 | LOC_Os01g42950 | Os01g0616100 | - | Detail |
| CX1g004723 | 1:21,992,563-21,992,715 | + | - | - | - | - | - | Detail |
| CX1g004354 | 1:22,008,500-22,011,744 | + | C1H1g00446 | C2H1g04418 | LOC_Os01g42960 | Os01g0616333 | - | Detail |
| CX1g002070 | 1:22,019,322-22,025,636 | - | C1H1g28451 | C2H1g00927 | LOC_Os01g42970 | Os01g0616400 | - | Detail |
| CX1g000783 | 1:22,028,282-22,030,569 | + | C1H1g01886 | C2H1g26183 | LOC_Os01g42980 | Os01g0616500 | - | Detail |
| CX1g005608 | 1:22,031,622-22,034,490 | + | C1H1g19102 | C2H1g13748 | LOC_Os01g42990 | Os01g0616600 | - | Detail |