| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g01447 | 8:13,803,678-13,804,413 | - | - | - | - | - | - | Detail |
| C1H8g07144 | 8:13,886,184-13,887,921 | - | - | - | - | - | - | Detail |
| C1H8g00025 | 8:13,981,805-13,983,218 | + | - | CX8g053307 | - | Os08g0132700 | - | Detail |
| C1H8g19336 | 8:13,986,246-13,988,669 | - | C2H8g28308 | CX8g054300 | LOC_Os08g26820 | Os08g0356500 | - | Detail |
| C1H8g18441 | 8:14,015,163-14,016,978 | - | C2H8g20766 | CX8g051633 | LOC_Os08g26850 | Os08g0356800 | - | Detail |
| C1H8g10235 | 8:14,022,287-14,026,990 | - | C2H8g22181 | CX8g052874 | LOC_Os08g26870 | Os08g0357000 | - | Detail |
| C1H8g07010 | 8:14,057,485-14,058,765 | + | C2H8g00680 | CX8g053523 | LOC_Os08g26880 | Os08g0357300 | bZIP65 | Detail |
| C1H8g29066 | 8:14,105,689-14,106,542 | + | C2H8g07337 | CX8g053242 | LOC_Os08g26990 | Os08g0377200 | RR12, OsRR12, Rra11, OsRR8, OsRRA11 | Detail |
| C1H8g02454 | 8:14,114,136-14,117,912 | + | C2H8g28936 | CX8g054278 | LOC_Os08g27010 | Os08g0359000 | - | Detail |
| C1H8g02680 | 8:14,121,881-14,125,655 | - | C2H8g09133 | CX8g051553 | LOC_Os08g27030 | Os08g0359100 | - | Detail |
| C1H8g21753 | 8:14,128,315-14,132,598 | - | C2H8g00972 | CX8g051553 | LOC_Os08g27040 | Os08g0359100 | - | Detail |
| C1H8g11326 | 8:14,134,650-14,139,979 | - | C2H8g23684 | CX8g051132 | LOC_Os08g27050 | Os08g0359300 | - | Detail |
| C1H8g05675 | 8:14,143,241-14,147,194 | - | C2H8g05827 | CX8g052155 | LOC_Os08g27070 | Os08g0359500 | - | Detail |
| C1H8g17538 | 8:14,159,620-14,162,764 | - | - | CX8g054446 | - | - | - | Detail |
| C1H8g22276 | 8:14,163,136-14,164,036 | - | - | - | - | - | - | Detail |
| C1H8g22429 | 8:14,174,312-14,178,543 | - | C2H8g05453 | CX8g052785 | LOC_Os08g27090 | Os08g0359600 | - | Detail |
| C1H8g25840 | 8:14,179,041-14,179,986 | - | - | - | - | - | - | Detail |
| C1H8g04623 | 8:14,198,154-14,198,780 | + | C2H8g14900 | CX8g051829 | LOC_Os08g27140 | Os08g0360000 | - | Detail |
| C1H8g06614 | 8:14,199,527-14,203,155 | - | C2H8g24252 | CX8g052599 | LOC_Os08g27150 | Os08g0360100 | - | Detail |
| C1H8g29721 | 8:14,204,156-14,204,501 | + | C2H8g16891 | CX8g051857 | LOC_Os08g27160 | Os08g0360200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037840 | 5:3,367,036-3,369,125 | + | C1H5g06265 | C2H5g18692 | LOC_Os05g07260 | Os05g0165400 | - | Detail |
| CX5g038880 | 5:3,370,243-3,372,174 | - | C1H5g20042 | C2H5g16692 | LOC_Os05g07270 | Os05g0165450 | - | Detail |
| CX5g040872 | 5:3,384,447-3,385,082 | - | C1H5g28741 | C2H5g01656 | LOC_Os05g07280 | Os05g0165500 | - | Detail |
| CX5g038084 | 5:3,398,163-3,400,613 | - | C1H5g02115 | C2H5g05162 | LOC_Os05g07300 | Os05g0165900 | SDRLK-34 | Detail |
| CX5g037826 | 5:3,440,715-3,440,909 | + | - | - | - | - | - | Detail |
| CX5g039301 | 5:3,442,561-3,442,764 | - | - | - | - | - | - | Detail |
| CX5g038409 | 5:3,463,659-3,465,546 | + | C1H5g29782 | C2H5g29353 | LOC_Os05g07600 | Os05g0167600 | - | Detail |
| CX5g036835 | 5:3,476,726-3,477,579 | - | C1H5g29782 | C2H5g29353 | LOC_Os05g07626 | Os05g0168200 | - | Detail |
| CX5g040579 | 5:3,479,957-3,483,322 | - | C1H5g13498 | C2H5g25838 | LOC_Os05g07632 | Os05g0168300 | - | Detail |
| CX5g038149 | 5:3,485,266-3,487,911 | + | C1H5g21705 | C2H5g09777 | LOC_Os05g07640 | Os05g0168400 | - | Detail |
| CX5g037349 | 5:3,490,143-3,492,534 | - | C1H5g19416 | C2H5g10524 | LOC_Os05g07650 | Os05g0168500 | - | Detail |
| CX5g038059 | 5:3,495,153-3,495,410 | - | - | - | - | - | - | Detail |
| CX5g041039 | 5:3,512,428-3,514,480 | - | C1H5g16283 | C2H5g24295 | LOC_Os01g07370 | Os05g0168800 | - | Detail |
| CX5g039557 | 5:3,517,340-3,517,519 | - | - | - | - | - | - | Detail |
| CX5g041121 | 5:3,519,040-3,520,937 | - | C1H5g10099 | C2H5g20659 | LOC_Os01g07376 | Os05g0169000 | - | Detail |
| CX5g039173 | 5:3,525,557-3,526,485 | + | C1H5g10237 | C2H5g10103 | LOC_Os05g07700 | Os05g0169100 | - | Detail |
| CX5g038430 | 5:3,528,744-3,532,202 | + | C1H5g03238 | C2H5g16499 | LOC_Os01g07400 | Os05g0169200 | - | Detail |
| CX5g040591 | 5:3,536,112-3,538,706 | + | C1H5g25376 | C2H5g06689 | LOC_Os01g07500 | Os05g0169300 | - | Detail |
| CX5g037386 | 5:3,543,575-3,546,998 | - | C1H5g20363 | C2H5g00785 | LOC_Os01g07520 | Os05g0169400 | - | Detail |
| CX5g037445 | 5:3,548,926-3,549,180 | + | - | - | - | Os05g0169500 | - | Detail |