| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05951 | 2:28,575,920-28,584,186 | + | C1H2g30195 | CX2g023148 | LOC_Os02g50970 | Os02g0743500 | DSM1 | Detail |
| C2H2g06723 | 2:28,585,666-28,586,568 | + | C1H2g30021 | CX2g020133 | LOC_Os02g50980 | Os02g0743600 | - | Detail |
| C2H2g09821 | 2:28,597,939-28,600,115 | + | C1H2g25365 | CX2g022084 | LOC_Os02g50990 | Os02g0743700 | - | Detail |
| C2H2g07616 | 2:28,601,564-28,604,792 | - | C1H2g26688 | CX2g021744 | LOC_Os02g51000 | Os02g0743800 | - | Detail |
| C2H2g25853 | 2:28,606,085-28,606,940 | - | C1H2g19131 | CX2g020534 | LOC_Os02g51010 | Os02g0743900 | CASP4, OsCASP4 | Detail |
| C2H2g21289 | 2:28,607,773-28,608,851 | + | C1H2g30910 | CX2g022263 | LOC_Os02g51020 | Os02g0744000 | - | Detail |
| C2H2g00809 | 2:28,617,908-28,620,323 | + | C1H2g05493 | CX2g019710 | LOC_Os02g51030 | Os02g0744100 | - | Detail |
| C2H2g22842 | 2:28,629,829-28,630,897 | + | C1H2g28698 | CX2g024332 | LOC_Os02g51040 | Os02g0744200 | - | Detail |
| C2H2g01303 | 2:28,635,470-28,639,402 | - | C1H2g29538 | CX2g024594 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| C2H2g07487 | 2:28,640,951-28,645,897 | - | C1H2g23191 | CX2g022323 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| C2H2g08168 | 2:28,653,125-28,655,257 | + | C1H2g05032 | CX2g022360 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| C2H2g17927 | 2:28,660,430-28,663,324 | - | C1H2g28990 | CX2g022714 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| C2H2g17969 | 2:28,671,089-28,674,189 | + | C1H2g29361 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C2H2g17512 | 2:28,681,902-28,687,738 | - | C1H2g10044 | - | - | - | - | Detail |
| C2H2g06955 | 2:28,685,325-28,687,481 | + | C1H2g22873 | CX2g024809 | LOC_Os02g42970 | Os02g0745300 | - | Detail |
| C2H2g19332 | 2:28,694,298-28,696,257 | + | C1H2g26267 | CX2g024083 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| C2H2g29488 | 2:28,697,677-28,698,186 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g06018 | 2:28,698,248-28,704,122 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g18017 | 2:28,705,109-28,707,292 | + | C1H2g00830 | CX2g024841 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| C2H2g26607 | 2:28,709,067-28,712,633 | + | C1H2g30172 | CX2g020073 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g036788 | 5:3,241,915-3,249,236 | + | C1H5g21362 | C2H5g12999 | LOC_Os05g07030 | Os05g0163000 | - | Detail |
| CX5g037977 | 5:3,250,088-3,254,349 | - | C1H5g28911 | C2H5g16153 | LOC_Os05g07040 | Os05g0163100 | - | Detail |
| CX5g040279 | 5:3,260,403-3,270,568 | - | C1H5g18411 | C2H5g03965 | LOC_Os05g07050 | Os05g0163250 | - | Detail |
| CX5g040231 | 5:3,271,975-3,272,730 | - | C1H5g19054 | C2H5g22988 | LOC_Os05g07060 | Os05g0163300 | - | Detail |
| CX5g037910 | 5:3,274,467-3,276,763 | - | C1H5g11075 | C2H5g04935 | LOC_Os05g07070 | Os05g0163400 | - | Detail |
| CX5g037218 | 5:3,282,221-3,283,924 | - | C1H5g02115 | C2H5g13797 | LOC_Os05g07080 | Os05g0163500 | SDRLP-3 | Detail |
| CX5g038895 | 5:3,286,430-3,293,562 | - | C1H5g20466 | C2H5g00170 | LOC_Os05g07090 | Os05g0163700 | - | Detail |
| CX5g038094 | 5:3,299,495-3,301,027 | + | C1H5g09469 | C2H5g23603 | LOC_Os05g07120 | Os05g0163900 | - | Detail |
| CX5g038741 | 5:3,304,551-3,312,573 | + | C1H5g27443 | C2H5g20534 | LOC_Os05g07130 | Os05g0164100 | - | Detail |
| CX5g039625 | 5:3,313,575-3,314,093 | + | C1H5g28482 | C2H5g20467 | LOC_Os05g07140 | Os05g0164200 | - | Detail |
| CX5g038693 | 5:3,317,592-3,317,774 | + | - | - | - | - | - | Detail |
| CX5g038547 | 5:3,319,632-3,319,834 | - | - | - | - | - | - | Detail |
| CX5g037379 | 5:3,320,830-3,328,599 | - | C1H5g31024 | C2H5g04936 | LOC_Os05g07180 | Os05g0160600 | - | Detail |
| CX5g039548 | 5:3,331,656-3,334,382 | - | C1H5g05167 | C2H5g19390 | LOC_Os05g07210 | Os05g0164800 | - | Detail |
| CX5g037261 | 5:3,337,040-3,341,986 | - | C1H5g24618 | C2H5g25207 | LOC_Os05g07220 | Os05g0164900 | OsNRP4 | Detail |
| CX5g037870 | 5:3,343,785-3,344,472 | - | C1H1g01233 | C2H5g22059 | LOC_Os11g42360 | - | - | Detail |
| CX5g039761 | 5:3,344,522-3,344,923 | + | - | - | - | Os11g0642900 | - | Detail |
| CX5g039628 | 5:3,357,756-3,357,983 | - | - | - | - | - | - | Detail |
| CX5g038196 | 5:3,359,423-3,359,953 | + | C1H5g20154 | C2H5g17238 | LOC_Os05g07240 | Os05g0165200 | - | Detail |
| CX5g039238 | 5:3,360,943-3,361,831 | + | - | - | - | - | - | Detail |