| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15340 | 5:1,779,981-1,784,195 | + | C1H5g15318 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C2H5g09071 | 5:1,784,743-1,786,926 | - | C1H5g22825 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C2H5g11738 | 5:1,798,378-1,799,442 | + | - | CX5g040743 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| C2H5g01548 | 5:1,800,699-1,804,493 | - | C1H5g10755 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C2H5g23155 | 5:1,829,551-1,835,745 | + | C1H5g30580 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C2H5g15489 | 5:1,843,721-1,844,729 | + | - | - | - | - | - | Detail |
| C2H5g06046 | 5:1,849,609-1,855,994 | + | C1H5g18480 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C2H5g14079 | 5:1,857,180-1,858,849 | + | C1H5g19392 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C2H5g14963 | 5:1,859,884-1,863,799 | + | C1H5g26357 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C2H5g23559 | 5:1,864,493-1,869,943 | - | C1H5g12317 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C2H5g03222 | 5:1,881,639-1,882,913 | + | C1H5g04306 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C2H5g28363 | 5:1,883,175-1,884,682 | - | C1H5g13155 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C2H5g07352 | 5:1,899,671-1,900,263 | - | C1H5g04433 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C2H5g19962 | 5:1,916,898-1,919,055 | + | C1H5g25088 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C2H5g25266 | 5:1,922,063-1,923,286 | - | C1H5g25511 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C2H5g23665 | 5:1,933,084-1,934,268 | - | C1H5g18751 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| C2H5g30393 | 5:1,934,410-1,935,053 | + | - | - | - | - | - | Detail |
| C2H5g03061 | 5:1,970,541-1,971,097 | - | C1H5g17291 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C2H5g22528 | 5:1,971,471-1,974,178 | + | C1H5g01364 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C2H5g28238 | 5:1,982,372-1,984,229 | + | C1H1g13588 | CX5g039047 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039850 | 5:2,955,593-2,959,897 | + | C1H5g05673 | C2H5g22849 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| CX5g037102 | 5:2,960,531-2,964,612 | - | C1H5g28371 | C2H5g05727 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| CX5g037159 | 5:2,980,859-2,986,755 | + | C1H5g06427 | C2H5g19140 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| CX5g040180 | 5:2,992,498-3,005,679 | + | C1H5g15255 | C2H5g13429 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| CX5g036830 | 5:3,010,331-3,012,821 | + | C1H5g29215 | C2H5g10674 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| CX5g040661 | 5:3,013,982-3,017,591 | - | C1H5g24999 | C2H5g18018 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| CX5g037735 | 5:3,020,255-3,027,284 | - | C1H5g19191 | C2H5g19257 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| CX5g040814 | 5:3,041,017-3,042,355 | + | - | - | - | - | - | Detail |
| CX5g036773 | 5:3,044,204-3,047,555 | + | C1H5g26427 | C2H5g24095 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| CX5g040221 | 5:3,049,200-3,052,387 | + | C1H5g22506 | C2H5g30095 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| CX5g038580 | 5:3,055,292-3,055,447 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g038772 | 5:3,058,257-3,058,682 | - | C1H5g10936 | C2H5g06168 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| CX5g039426 | 5:3,066,166-3,075,870 | + | C1H5g01032 | C2H5g24726 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| CX5g038917 | 5:3,115,190-3,118,722 | - | C1H5g08386 | C2H5g14563 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| CX5g036690 | 5:3,128,035-3,132,634 | + | C1H5g11456 | C2H5g12914 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| CX5g038822 | 5:3,194,353-3,196,183 | - | C1H5g04552 | C2H5g10505 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| CX5g040374 | 5:3,201,079-3,211,475 | - | C1H5g19592 | C2H5g18624 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| CX5g038942 | 5:3,222,586-3,225,114 | + | C1H5g07927 | C2H5g03787 | LOC_Os05g06990 | Os05g0162500 | - | Detail |
| CX5g040436 | 5:3,225,989-3,228,938 | - | C1H5g00882 | C2H5g07564 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| CX5g039947 | 5:3,231,548-3,232,833 | - | C1H5g10645 | C2H5g12125 | LOC_Os05g07010 | Os05g0162800 | - | Detail |