| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g12140 | 7:21,586,363-21,588,497 | + | C1H7g18777 | CX7g048604 | LOC_Os07g43925 | Os07g0633000 | - | Detail |
| C2H7g19279 | 7:21,588,080-21,592,943 | - | C1H7g18776 | CX7g045989 | LOC_Os07g43940 | Os07g0633100 | - | Detail |
| C2H7g01196 | 7:21,593,910-21,596,442 | + | C1H7g15625 | CX7g049436 | LOC_Os07g43950 | Os07g0633200 | - | Detail |
| C2H7g16598 | 7:21,611,387-21,614,372 | + | C1H7g04691 | CX7g047602 | LOC_Os07g43970 | Os07g0633400 | OsIQM5 | Detail |
| C2H7g19273 | 7:21,615,698-21,619,709 | - | C1H7g26280 | CX7g046486 | LOC_Os07g43980 | Os07g0633500 | OsRH36 | Detail |
| C2H7g03945 | 7:21,624,926-21,625,725 | + | C1H7g05093 | - | - | Os07g0633800 | - | Detail |
| C2H7g26756 | 7:21,631,709-21,633,948 | - | C1H7g21281 | CX7g050101 | LOC_Os07g44020 | Os07g0634000 | - | Detail |
| C2H7g01782 | 7:21,635,043-21,638,338 | - | C1H7g17397 | CX7g048861 | LOC_Os07g44030 | Os07g0634100 | - | Detail |
| C2H7g14350 | 7:21,650,491-21,651,354 | + | C1H7g30273 | CX7g050292 | LOC_Os07g44040 | Os07g0634200 | - | Detail |
| C2H7g04768 | 7:21,653,395-21,654,239 | - | C1H7g10717 | CX7g050133 | LOC_Os07g44050 | Os07g0634300 | - | Detail |
| C2H7g17833 | 7:21,655,324-21,656,735 | - | C1H7g14437 | CX7g049819 | LOC_Os07g44060 | Os07g0634400 | - | Detail |
| C2H7g24236 | 7:21,671,421-21,675,591 | + | C1H7g29370 | CX7g049242 | LOC_Os07g44070 | Os07g0634600 | - | Detail |
| C2H7g14905 | 7:21,686,358-21,688,502 | + | C1H7g19007 | CX7g045999 | LOC_Os07g30130 | Os07g0634900 | - | Detail |
| C2H7g11259 | 7:21,697,540-21,699,243 | + | C1H7g25697 | CX7g046074 | LOC_Os07g44110 | Os07g0635200 | - | Detail |
| C2H7g27547 | 7:21,702,087-21,702,320 | + | C1H7g01610 | CX7g046004 | LOC_Os07g44140 | Os07g0419000 | - | Detail |
| C2H7g26688 | 7:21,705,139-21,706,974 | + | C1H7g29132 | CX7g048214 | LOC_Os07g44130 | Os07g0635300 | - | Detail |
| C2H7g03243 | 7:21,712,771-21,714,449 | + | C1H7g21192 | CX7g046927 | LOC_Os07g44140 | Os07g0635500 | - | Detail |
| C2H7g30551 | 7:21,719,449-21,722,444 | + | C1H7g17502 | CX7g047263 | LOC_Os07g44140 | Os07g0635700 | - | Detail |
| C2H7g09407 | 7:21,722,599-21,724,716 | + | C1H7g18607 | CX7g048404 | LOC_Os07g44170 | Os07g0635800 | - | Detail |
| C2H7g29761 | 7:21,729,008-21,729,304 | + | C1H7g17160 | CX7g047931 | LOC_Os07g44180 | Os07g0635900 | OsLti6a | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039850 | 5:2,955,593-2,959,897 | + | C1H5g05673 | C2H5g22849 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| CX5g037102 | 5:2,960,531-2,964,612 | - | C1H5g28371 | C2H5g05727 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| CX5g037159 | 5:2,980,859-2,986,755 | + | C1H5g06427 | C2H5g19140 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| CX5g040180 | 5:2,992,498-3,005,679 | + | C1H5g15255 | C2H5g13429 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| CX5g036830 | 5:3,010,331-3,012,821 | + | C1H5g29215 | C2H5g10674 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| CX5g040661 | 5:3,013,982-3,017,591 | - | C1H5g24999 | C2H5g18018 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| CX5g037735 | 5:3,020,255-3,027,284 | - | C1H5g19191 | C2H5g19257 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| CX5g040814 | 5:3,041,017-3,042,355 | + | - | - | - | - | - | Detail |
| CX5g036773 | 5:3,044,204-3,047,555 | + | C1H5g26427 | C2H5g24095 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| CX5g040221 | 5:3,049,200-3,052,387 | + | C1H5g22506 | C2H5g30095 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| CX5g038580 | 5:3,055,292-3,055,447 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g038772 | 5:3,058,257-3,058,682 | - | C1H5g10936 | C2H5g06168 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| CX5g039426 | 5:3,066,166-3,075,870 | + | C1H5g01032 | C2H5g24726 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| CX5g038917 | 5:3,115,190-3,118,722 | - | C1H5g08386 | C2H5g14563 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| CX5g036690 | 5:3,128,035-3,132,634 | + | C1H5g11456 | C2H5g12914 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| CX5g038822 | 5:3,194,353-3,196,183 | - | C1H5g04552 | C2H5g10505 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| CX5g040374 | 5:3,201,079-3,211,475 | - | C1H5g19592 | C2H5g18624 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| CX5g038942 | 5:3,222,586-3,225,114 | + | C1H5g07927 | C2H5g03787 | LOC_Os05g06990 | Os05g0162500 | - | Detail |
| CX5g040436 | 5:3,225,989-3,228,938 | - | C1H5g00882 | C2H5g07564 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| CX5g039947 | 5:3,231,548-3,232,833 | - | C1H5g10645 | C2H5g12125 | LOC_Os05g07010 | Os05g0162800 | - | Detail |