| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17524 | 2:23,947,274-23,950,026 | + | C2H2g12696 | CX2g022016 | LOC_Os02g42730 | Os02g0640200 | - | Detail |
| C1H2g04851 | 2:23,950,253-23,952,081 | - | C2H2g15272 | CX2g021377 | LOC_Os02g42740 | Os02g0640300 | - | Detail |
| C1H2g14559 | 2:23,959,711-23,961,958 | + | C2H2g00151 | CX2g019980 | LOC_Os02g42790 | Os02g0640600 | - | Detail |
| C1H2g19374 | 2:23,962,808-23,964,397 | + | C2H2g14576 | CX2g024889 | LOC_Os02g42800 | Os02g0640700 | - | Detail |
| C1H2g20340 | 2:23,965,428-23,967,120 | + | C2H2g14056 | CX2g024790 | LOC_Os02g42810 | Os02g0640800 | - | Detail |
| C1H2g00119 | 2:23,968,411-23,969,982 | - | C2H2g23528 | CX2g023850 | LOC_Os02g42820 | Os02g0641000 | OsPLIM2a | Detail |
| C1H2g17415 | 2:23,987,192-23,989,902 | + | C2H2g10376 | CX2g022946 | LOC_Os02g42850 | Os02g0641300 | Os2R_MYB27 | Detail |
| C1H2g20731 | 2:23,994,315-24,001,519 | + | C2H2g08467 | CX2g020968 | LOC_Os02g42860 | Os02g0641800 | - | Detail |
| C1H2g27016 | 2:24,005,475-24,006,256 | + | C2H2g24080 | CX2g021972 | LOC_Os02g42870 | Os02g0641900 | OsMYB38 | Detail |
| C1H2g17496 | 2:24,007,020-24,007,655 | + | C2H2g15381 | CX2g020159 | LOC_Os02g42870 | Os02g0641900 | OsMYB38 | Detail |
| C1H2g05136 | 2:24,016,138-24,018,174 | - | C2H2g19455 | CX2g020536 | LOC_Os02g42880 | Os02g0642200 | - | Detail |
| C1H2g14682 | 2:24,022,761-24,026,303 | - | C2H2g09165 | CX2g024310 | LOC_Os02g42890 | Os02g0642300 | - | Detail |
| C1H2g11598 | 2:24,032,149-24,039,317 | - | C2H2g12130 | CX2g020569 | LOC_Os02g42910 | Os02g0642600 | OsSHOC1 | Detail |
| C1H2g23908 | 2:24,043,820-24,048,319 | + | C2H2g00514 | CX2g022233 | LOC_Os02g42920 | Os02g0642700 | - | Detail |
| C1H2g14539 | 2:24,051,139-24,054,217 | - | C2H2g24801 | CX2g024032 | LOC_Os02g42940 | Os02g0643000 | - | Detail |
| C1H2g02413 | 2:24,062,301-24,064,497 | - | C2H2g00752 | CX2g024377 | LOC_Os02g42950 | Os02g0643200 | YAB4, OsYAB4, OsYAB7 | Detail |
| C1H2g27716 | 2:24,077,078-24,080,185 | + | C2H2g25256 | CX2g021017 | LOC_Os02g42960 | Os02g0643500 | - | Detail |
| C1H2g25346 | 2:24,080,901-24,082,381 | - | C2H2g01584 | CX2g023347 | LOC_Os02g42970 | Os02g0643600 | - | Detail |
| C1H2g29638 | 2:24,109,226-24,110,115 | + | C2H2g10457 | CX2g023319 | LOC_Os02g43000 | Os02g0643900 | - | Detail |
| C1H2g20741 | 2:24,111,628-24,112,338 | + | C2H2g15944 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039850 | 5:2,955,593-2,959,897 | + | C1H5g05673 | C2H5g22849 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| CX5g037102 | 5:2,960,531-2,964,612 | - | C1H5g28371 | C2H5g05727 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| CX5g037159 | 5:2,980,859-2,986,755 | + | C1H5g06427 | C2H5g19140 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| CX5g040180 | 5:2,992,498-3,005,679 | + | C1H5g15255 | C2H5g13429 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| CX5g036830 | 5:3,010,331-3,012,821 | + | C1H5g29215 | C2H5g10674 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| CX5g040661 | 5:3,013,982-3,017,591 | - | C1H5g24999 | C2H5g18018 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| CX5g037735 | 5:3,020,255-3,027,284 | - | C1H5g19191 | C2H5g19257 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| CX5g040814 | 5:3,041,017-3,042,355 | + | - | - | - | - | - | Detail |
| CX5g036773 | 5:3,044,204-3,047,555 | + | C1H5g26427 | C2H5g24095 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| CX5g040221 | 5:3,049,200-3,052,387 | + | C1H5g22506 | C2H5g30095 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| CX5g038580 | 5:3,055,292-3,055,447 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g038772 | 5:3,058,257-3,058,682 | - | C1H5g10936 | C2H5g06168 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| CX5g039426 | 5:3,066,166-3,075,870 | + | C1H5g01032 | C2H5g24726 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| CX5g038917 | 5:3,115,190-3,118,722 | - | C1H5g08386 | C2H5g14563 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| CX5g036690 | 5:3,128,035-3,132,634 | + | C1H5g11456 | C2H5g12914 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| CX5g038822 | 5:3,194,353-3,196,183 | - | C1H5g04552 | C2H5g10505 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| CX5g040374 | 5:3,201,079-3,211,475 | - | C1H5g19592 | C2H5g18624 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| CX5g038942 | 5:3,222,586-3,225,114 | + | C1H5g07927 | C2H5g03787 | LOC_Os05g06990 | Os05g0162500 | - | Detail |
| CX5g040436 | 5:3,225,989-3,228,938 | - | C1H5g00882 | C2H5g07564 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| CX5g039947 | 5:3,231,548-3,232,833 | - | C1H5g10645 | C2H5g12125 | LOC_Os05g07010 | Os05g0162800 | - | Detail |