| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g13616 | 11:24,500,253-24,501,556 | - | C2H11g25730 | CX11g012045 | LOC_Os11g47310 | Os11g0692500 | - | Detail |
| C1H11g25519 | 11:24,501,721-24,502,801 | - | C2H11g02264 | CX11g012045 | LOC_Os11g47290 | Os11g0695800 | - | Detail |
| C1H11g05788 | 11:24,502,838-24,503,635 | - | C2H11g02264 | CX11g013565 | LOC_Os11g47290 | Os11g0695800 | - | Detail |
| C1H11g07012 | 11:24,509,521-24,517,075 | - | C2H11g06125 | CX11g014828 | LOC_Os11g47320 | Os11g0693900 | - | Detail |
| C1H11g12238 | 11:24,518,165-24,521,918 | + | C2H11g17622 | CX11g013008 | LOC_Os11g47330 | Os11g0696200 | EDT1 | Detail |
| C1H11g22878 | 11:24,527,232-24,530,038 | + | C2H11g29185 | CX11g011040 | LOC_Os11g47350 | Os11g0696400 | - | Detail |
| C1H11g18630 | 11:24,540,437-24,543,969 | + | C2H11g24829 | - | - | Os11g0696600 | - | Detail |
| C1H11g24457 | 11:24,544,645-24,546,643 | + | - | - | - | - | - | Detail |
| C1H11g09166 | 11:24,548,878-24,550,241 | + | C2H11g28625 | - | - | - | - | Detail |
| C1H11g18304 | 11:24,552,564-24,553,827 | - | C2H11g02299 | CX11g014713 | LOC_Os11g47390 | Os11g0696900 | - | Detail |
| C1H11g08231 | 11:24,553,859-24,554,808 | - | C2H11g02299 | CX11g014713 | LOC_Os11g47390 | Os11g0696900 | - | Detail |
| C1H11g09170 | 11:24,584,059-24,584,405 | + | C2H11g01524 | CX11g014979 | LOC_Os11g47441 | Os11g0699532 | - | Detail |
| C1H11g28594 | 11:24,615,342-24,618,415 | + | C2H11g22015 | CX11g014691 | LOC_Os11g47447 | Os11g0700100 | - | Detail |
| C1H11g17473 | 11:24,668,812-24,669,733 | - | C2H11g14378 | CX11g014459 | LOC_Os11g47460 | Os11g0700500 | OsMYBAS1 | Detail |
| C1H11g28548 | 11:24,697,447-24,698,319 | + | C2H11g21265 | CX11g014219 | LOC_Os11g47520 | Os11g0701100 | - | Detail |
| C1H11g14521 | 11:24,700,096-24,700,968 | + | C2H11g11867 | CX11g014219 | LOC_Os11g47530 | Os11g0701200 | - | Detail |
| C1H11g25719 | 11:24,703,845-24,704,714 | + | C2H11g24600 | CX11g014219 | LOC_Os11g47550 | Os11g0701400 | - | Detail |
| C1H11g05290 | 11:24,707,427-24,708,281 | + | C2H11g14715 | CX11g014219 | LOC_Os11g47560 | Os11g0701500 | - | Detail |
| C1H11g00801 | 11:24,713,094-24,713,936 | + | C2H11g14762 | CX11g014219 | LOC_Os11g47570 | Os11g0701600 | - | Detail |
| C1H11g05570 | 11:24,724,314-24,725,237 | - | C2H11g10596 | CX11g012151 | LOC_Os11g47600 | Os11g0702100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039850 | 5:2,955,593-2,959,897 | + | C1H5g05673 | C2H5g22849 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| CX5g037102 | 5:2,960,531-2,964,612 | - | C1H5g28371 | C2H5g05727 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| CX5g037159 | 5:2,980,859-2,986,755 | + | C1H5g06427 | C2H5g19140 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| CX5g040180 | 5:2,992,498-3,005,679 | + | C1H5g15255 | C2H5g13429 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| CX5g036830 | 5:3,010,331-3,012,821 | + | C1H5g29215 | C2H5g10674 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| CX5g040661 | 5:3,013,982-3,017,591 | - | C1H5g24999 | C2H5g18018 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| CX5g037735 | 5:3,020,255-3,027,284 | - | C1H5g19191 | C2H5g19257 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| CX5g040814 | 5:3,041,017-3,042,355 | + | - | - | - | - | - | Detail |
| CX5g036773 | 5:3,044,204-3,047,555 | + | C1H5g26427 | C2H5g24095 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| CX5g040221 | 5:3,049,200-3,052,387 | + | C1H5g22506 | C2H5g30095 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| CX5g038580 | 5:3,055,292-3,055,447 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g038772 | 5:3,058,257-3,058,682 | - | C1H5g10936 | C2H5g06168 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| CX5g039426 | 5:3,066,166-3,075,870 | + | C1H5g01032 | C2H5g24726 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| CX5g038917 | 5:3,115,190-3,118,722 | - | C1H5g08386 | C2H5g14563 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| CX5g036690 | 5:3,128,035-3,132,634 | + | C1H5g11456 | C2H5g12914 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| CX5g038822 | 5:3,194,353-3,196,183 | - | C1H5g04552 | C2H5g10505 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| CX5g040374 | 5:3,201,079-3,211,475 | - | C1H5g19592 | C2H5g18624 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| CX5g038942 | 5:3,222,586-3,225,114 | + | C1H5g07927 | C2H5g03787 | LOC_Os05g06990 | Os05g0162500 | - | Detail |
| CX5g040436 | 5:3,225,989-3,228,938 | - | C1H5g00882 | C2H5g07564 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| CX5g039947 | 5:3,231,548-3,232,833 | - | C1H5g10645 | C2H5g12125 | LOC_Os05g07010 | Os05g0162800 | - | Detail |