| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g12213 | 11:585,891-587,210 | - | C2H11g14635 | CX11g014719 | LOC_Os11g02240 | Os11g0113700 | CIPK15, OsCIPK15 | Detail |
| C1H11g20210 | 11:594,335-595,539 | - | C2H11g27776 | - | - | - | - | Detail |
| C1H11g09702 | 11:596,865-597,284 | - | C2H11g20663 | CX11g013300 | LOC_Os11g02250 | Os11g0113900 | - | Detail |
| C1H11g16994 | 11:597,945-598,370 | + | C2H11g05482 | CX11g013914 | LOC_Os12g02220 | Os11g0114000 | - | Detail |
| C1H11g27070 | 11:599,741-600,961 | + | C2H12g25203 | CX11g013797 | LOC_Os11g02270 | Os11g0114150 | - | Detail |
| C1H11g01076 | 11:608,973-609,281 | + | C2H11g19119 | CX11g014585 | LOC_Os11g02290 | Os11g0114300 | - | Detail |
| C1H11g04618 | 11:611,193-612,449 | - | C2H11g10337 | CX11g012118 | - | Os11g0702400 | - | Detail |
| C1H11g17377 | 11:612,572-619,044 | - | C2H11g21262 | CX11g011382 | LOC_Os11g02305 | Os11g0114600 | - | Detail |
| C1H11g09594 | 11:621,610-629,524 | - | C2H11g25931 | CX11g012395 | LOC_Os11g02320 | Os11g0114700 | - | Detail |
| C1H11g12649 | 11:629,392-634,024 | + | C2H11g14700 | CX11g012066 | LOC_Os11g02310 | Os11g0114800 | - | Detail |
| C1H11g08604 | 11:634,745-635,233 | + | C2H11g03754 | CX11g011777 | LOC_Os11g02369 | Os11g0114900 | - | Detail |
| C1H11g27222 | 11:638,286-638,766 | + | C2H11g04551 | CX11g011777 | LOC_Os11g02350 | Os11g0115100 | - | Detail |
| C1H11g31022 | 11:644,113-645,065 | + | C2H11g03754 | CX11g011777 | LOC_Os11g02369 | Os11g0115350 | - | Detail |
| C1H11g13848 | 11:648,786-649,248 | + | C2H11g03754 | CX11g011777 | LOC_Os11g02389 | Os11g0115400 | OsLTP5 | Detail |
| C1H11g01860 | 11:654,359-655,295 | + | C2H11g07750 | CX11g011777 | LOC_Os11g02400 | Os11g0116000 | - | Detail |
| C1H11g19082 | 11:662,592-662,960 | + | C2H11g18036 | CX11g011777 | LOC_Os11g02400 | Os11g0116200 | - | Detail |
| C1H11g20495 | 11:674,588-675,097 | + | C2H11g15553 | CX11g013707 | LOC_Os11g02424 | Os11g0610600 | - | Detail |
| C1H11g10909 | 11:683,505-684,597 | - | C2H11g15631 | CX11g014283 | LOC_Os11g02440 | Os11g0116300 | OsCHIL1 | Detail |
| C1H11g02295 | 11:685,609-688,199 | + | C2H11g20016 | CX12g018356 | LOC_Os11g02450 | Os11g0116400 | - | Detail |
| C1H11g01957 | 11:688,571-696,645 | - | C2H11g19381 | CX11g013702 | LOC_Os11g02464 | Os11g0116550 | OsVSR3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039850 | 5:2,955,593-2,959,897 | + | C1H5g05673 | C2H5g22849 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| CX5g037102 | 5:2,960,531-2,964,612 | - | C1H5g28371 | C2H5g05727 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| CX5g037159 | 5:2,980,859-2,986,755 | + | C1H5g06427 | C2H5g19140 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| CX5g040180 | 5:2,992,498-3,005,679 | + | C1H5g15255 | C2H5g13429 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| CX5g036830 | 5:3,010,331-3,012,821 | + | C1H5g29215 | C2H5g10674 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| CX5g040661 | 5:3,013,982-3,017,591 | - | C1H5g24999 | C2H5g18018 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| CX5g037735 | 5:3,020,255-3,027,284 | - | C1H5g19191 | C2H5g19257 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| CX5g040814 | 5:3,041,017-3,042,355 | + | - | - | - | - | - | Detail |
| CX5g036773 | 5:3,044,204-3,047,555 | + | C1H5g26427 | C2H5g24095 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| CX5g040221 | 5:3,049,200-3,052,387 | + | C1H5g22506 | C2H5g30095 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| CX5g038580 | 5:3,055,292-3,055,447 | + | - | - | - | Os01g0728000 | - | Detail |
| CX5g038772 | 5:3,058,257-3,058,682 | - | C1H5g10936 | C2H5g06168 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| CX5g039426 | 5:3,066,166-3,075,870 | + | C1H5g01032 | C2H5g24726 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| CX5g038917 | 5:3,115,190-3,118,722 | - | C1H5g08386 | C2H5g14563 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| CX5g036690 | 5:3,128,035-3,132,634 | + | C1H5g11456 | C2H5g12914 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| CX5g038822 | 5:3,194,353-3,196,183 | - | C1H5g04552 | C2H5g10505 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| CX5g040374 | 5:3,201,079-3,211,475 | - | C1H5g19592 | C2H5g18624 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| CX5g038942 | 5:3,222,586-3,225,114 | + | C1H5g07927 | C2H5g03787 | LOC_Os05g06990 | Os05g0162500 | - | Detail |
| CX5g040436 | 5:3,225,989-3,228,938 | - | C1H5g00882 | C2H5g07564 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| CX5g039947 | 5:3,231,548-3,232,833 | - | C1H5g10645 | C2H5g12125 | LOC_Os05g07010 | Os05g0162800 | - | Detail |