| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14118 | 1:32,395,517-32,401,373 | + | C1H1g24327 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C2H1g23902 | 1:32,398,168-32,402,851 | - | C1H1g16353 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C2H1g01345 | 1:32,406,775-32,409,102 | - | C1H1g19302 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C2H1g07756 | 1:32,420,236-32,424,345 | - | C1H1g13651 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C2H1g20633 | 1:32,434,269-32,440,537 | - | C1H1g15673 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C2H1g02734 | 1:32,446,598-32,449,665 | - | C1H1g03471 | CX1g001145 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| C2H1g20941 | 1:32,450,205-32,454,017 | - | C1H1g05192 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C2H1g02794 | 1:32,471,192-32,473,761 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g02458 | 1:32,475,228-32,475,873 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g22636 | 1:32,481,628-32,483,736 | + | C1H1g31372 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C2H1g00294 | 1:32,484,972-32,486,025 | - | C1H1g22680 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C2H1g03435 | 1:32,498,447-32,502,232 | + | C1H1g21861 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C2H1g21411 | 1:32,510,019-32,510,465 | + | C1H1g01084 | CX1g005287 | - | - | - | Detail |
| C2H1g02642 | 1:32,512,794-32,514,472 | - | C1H1g22221 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C2H1g15087 | 1:32,557,274-32,557,974 | - | C1H1g30766 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C2H1g11964 | 1:32,568,881-32,574,221 | - | C1H1g06653 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C2H1g08929 | 1:32,583,855-32,589,389 | - | - | - | - | - | - | Detail |
| C2H1g27825 | 1:32,594,203-32,596,288 | + | C1H1g12873 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C2H1g08166 | 1:32,609,134-32,611,262 | + | C1H1g14003 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C2H1g04964 | 1:32,624,570-32,628,271 | + | C1H1g14553 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039916 | 5:2,589,295-2,589,486 | + | - | - | - | - | - | Detail |
| CX5g037943 | 5:2,592,320-2,598,332 | + | C1H5g04784 | C2H5g26954 | LOC_Os05g06110 | Os05g0153000 | - | Detail |
| CX5g037328 | 5:2,598,753-2,602,790 | + | C1H5g24254 | C2H5g10399 | LOC_Os05g06120 | Os05g0153132 | - | Detail |
| CX5g040549 | 5:2,604,728-2,607,906 | + | C1H5g04725 | C2H5g07974 | LOC_Os05g06130 | Os05g0153200 | - | Detail |
| CX5g039092 | 5:2,611,070-2,615,050 | - | C1H5g10196 | C2H5g00901 | LOC_Os05g06140 | Os05g0153300 | - | Detail |
| CX5g039715 | 5:2,619,210-2,619,368 | - | - | - | - | - | - | Detail |
| CX5g040166 | 5:2,621,143-2,626,379 | + | C1H5g03131 | C2H5g18938 | LOC_Os05g06150 | Os05g0153400 | - | Detail |
| CX5g040892 | 5:2,641,084-2,641,467 | - | - | - | - | - | - | Detail |
| CX5g039965 | 5:2,693,519-2,695,546 | + | C1H5g28483 | C2H5g19972 | LOC_Os05g06250 | Os05g0311500 | - | Detail |
| CX5g040552 | 5:2,695,829-2,702,430 | - | C1H5g03800 | C2H5g06803 | LOC_Os05g06260 | Os05g0154500 | - | Detail |
| CX5g037333 | 5:2,711,053-2,716,582 | - | C1H5g01837 | C2H5g27616 | LOC_Os05g06270 | Os05g0154600 | - | Detail |
| CX5g040216 | 5:2,724,323-2,730,630 | + | C1H5g27946 | C2H5g09642 | LOC_Os05g06280 | Os05g0154700 | SRS3, SAR1, SGL, BHS1 | Detail |
| CX5g037806 | 5:2,731,753-2,734,868 | + | C1H5g26961 | C2H5g27791 | LOC_Os05g06280 | Os05g0154800 | - | Detail |
| CX5g040502 | 5:2,735,578-2,739,049 | - | C1H5g28003 | C2H5g30402 | LOC_Os05g06290 | Os05g0154900 | - | Detail |
| CX5g038368 | 5:2,741,654-2,748,398 | - | C1H5g30938 | C2H5g11189 | LOC_Os05g06300 | Os05g0155000 | - | Detail |
| CX5g040045 | 5:2,752,020-2,754,178 | + | C1H5g03775 | C2H5g05414 | LOC_Os05g06310 | Os05g0155100 | - | Detail |
| CX5g040196 | 5:2,755,408-2,758,066 | - | C1H5g21843 | C2H5g28338 | LOC_Os05g06320 | Os05g0155200 | - | Detail |
| CX5g038322 | 5:2,762,889-2,765,971 | + | C1H5g06851 | C2H5g03225 | LOC_Os05g06330 | Os05g0155300 | - | Detail |
| CX5g036984 | 5:2,767,245-2,768,741 | - | C1H5g09648 | C2H5g24401 | LOC_Os05g06340 | Os05g0155400 | - | Detail |
| CX5g040802 | 5:2,770,975-2,771,175 | - | - | - | - | - | - | Detail |