| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05854 | 2:24,113,140-24,117,694 | - | C2H2g09002 | CX2g023178 | LOC_Os02g43010 | Os02g0644000 | OsVPE3, REP-2 | Detail |
| C1H2g12524 | 2:24,118,233-24,122,633 | + | C2H2g00079 | CX2g022755 | LOC_Os02g43020 | Os02g0644100 | - | Detail |
| C1H2g05443 | 2:24,131,693-24,135,108 | - | C2H2g15622 | CX2g021698 | LOC_Os02g43040 | Os02g0644500 | OsATG13a | Detail |
| C1H2g08836 | 2:24,140,556-24,141,254 | - | C2H2g02399 | CX2g021900 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g01413 | 2:24,145,393-24,151,404 | - | C2H2g04299 | CX2g023325 | LOC_Os02g43050 | Os02g0644400 | - | Detail |
| C1H2g28893 | 2:24,171,407-24,172,099 | - | C2H2g07056 | CX2g023648 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g14943 | 2:24,174,378-24,180,595 | - | C2H2g08300 | CX2g019755 | LOC_Os02g43130 | Os02g0645100 | - | Detail |
| C1H2g17222 | 2:24,195,210-24,196,754 | + | C2H2g12947 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C1H2g19085 | 2:24,230,972-24,232,280 | + | C2H2g19622 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C1H2g22786 | 2:24,234,363-24,237,015 | + | C2H2g11300 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C1H2g07582 | 2:24,238,018-24,244,395 | - | C2H2g09061 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C1H2g05654 | 2:24,264,441-24,269,829 | + | C2H2g12985 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C1H2g13691 | 2:24,274,583-24,275,783 | - | C2H2g29445 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C1H2g15207 | 2:24,281,913-24,285,136 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C1H2g10382 | 2:24,285,889-24,286,299 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0104500 | - | Detail |
| C1H2g25916 | 2:24,322,971-24,323,840 | + | C2H2g11895 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C1H2g29202 | 2:24,328,411-24,332,712 | - | C2H2g11536 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C1H2g22654 | 2:24,337,420-24,343,643 | + | C2H2g04607 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C1H2g29127 | 2:24,344,406-24,345,088 | - | C2H2g04813 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C1H2g17207 | 2:24,350,005-24,354,750 | - | C2H2g23002 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039916 | 5:2,589,295-2,589,486 | + | - | - | - | - | - | Detail |
| CX5g037943 | 5:2,592,320-2,598,332 | + | C1H5g04784 | C2H5g26954 | LOC_Os05g06110 | Os05g0153000 | - | Detail |
| CX5g037328 | 5:2,598,753-2,602,790 | + | C1H5g24254 | C2H5g10399 | LOC_Os05g06120 | Os05g0153132 | - | Detail |
| CX5g040549 | 5:2,604,728-2,607,906 | + | C1H5g04725 | C2H5g07974 | LOC_Os05g06130 | Os05g0153200 | - | Detail |
| CX5g039092 | 5:2,611,070-2,615,050 | - | C1H5g10196 | C2H5g00901 | LOC_Os05g06140 | Os05g0153300 | - | Detail |
| CX5g039715 | 5:2,619,210-2,619,368 | - | - | - | - | - | - | Detail |
| CX5g040166 | 5:2,621,143-2,626,379 | + | C1H5g03131 | C2H5g18938 | LOC_Os05g06150 | Os05g0153400 | - | Detail |
| CX5g040892 | 5:2,641,084-2,641,467 | - | - | - | - | - | - | Detail |
| CX5g039965 | 5:2,693,519-2,695,546 | + | C1H5g28483 | C2H5g19972 | LOC_Os05g06250 | Os05g0311500 | - | Detail |
| CX5g040552 | 5:2,695,829-2,702,430 | - | C1H5g03800 | C2H5g06803 | LOC_Os05g06260 | Os05g0154500 | - | Detail |
| CX5g037333 | 5:2,711,053-2,716,582 | - | C1H5g01837 | C2H5g27616 | LOC_Os05g06270 | Os05g0154600 | - | Detail |
| CX5g040216 | 5:2,724,323-2,730,630 | + | C1H5g27946 | C2H5g09642 | LOC_Os05g06280 | Os05g0154700 | SRS3, SAR1, SGL, BHS1 | Detail |
| CX5g037806 | 5:2,731,753-2,734,868 | + | C1H5g26961 | C2H5g27791 | LOC_Os05g06280 | Os05g0154800 | - | Detail |
| CX5g040502 | 5:2,735,578-2,739,049 | - | C1H5g28003 | C2H5g30402 | LOC_Os05g06290 | Os05g0154900 | - | Detail |
| CX5g038368 | 5:2,741,654-2,748,398 | - | C1H5g30938 | C2H5g11189 | LOC_Os05g06300 | Os05g0155000 | - | Detail |
| CX5g040045 | 5:2,752,020-2,754,178 | + | C1H5g03775 | C2H5g05414 | LOC_Os05g06310 | Os05g0155100 | - | Detail |
| CX5g040196 | 5:2,755,408-2,758,066 | - | C1H5g21843 | C2H5g28338 | LOC_Os05g06320 | Os05g0155200 | - | Detail |
| CX5g038322 | 5:2,762,889-2,765,971 | + | C1H5g06851 | C2H5g03225 | LOC_Os05g06330 | Os05g0155300 | - | Detail |
| CX5g036984 | 5:2,767,245-2,768,741 | - | C1H5g09648 | C2H5g24401 | LOC_Os05g06340 | Os05g0155400 | - | Detail |
| CX5g040802 | 5:2,770,975-2,771,175 | - | - | - | - | - | - | Detail |