| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16906 | 1:24,613,644-24,616,628 | - | C2H1g16188 | CX1g000015 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| C1H1g29519 | 1:24,622,739-24,623,272 | + | C2H1g27008 | CX1g005558 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| C1H1g06887 | 1:24,623,568-24,623,812 | - | - | - | - | - | - | Detail |
| C1H1g26426 | 1:24,624,556-24,628,000 | - | C2H1g05416 | CX1g003719 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| C1H1g29626 | 1:24,628,250-24,632,776 | - | C2H1g03818 | CX1g005342 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| C1H1g16435 | 1:24,642,264-24,651,671 | - | C2H1g08537 | CX1g002269 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| C1H1g18336 | 1:24,663,387-24,663,774 | + | C2H1g09956 | CX1g002853 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| C1H1g27753 | 1:24,665,795-24,669,624 | - | C2H1g02713 | CX1g000620 | LOC_Os01g48370 | Os01g0674500 | - | Detail |
| C1H1g00871 | 1:24,674,928-24,681,189 | + | C2H1g18985 | CX1g004696 | LOC_Os01g48380 | Os01g0674700 | ASL3 | Detail |
| C1H1g21765 | 1:24,682,675-24,689,454 | + | C2H1g24321 | CX1g004277 | LOC_Os01g48390 | Os01g0674800 | - | Detail |
| C1H1g11274 | 1:24,692,451-24,694,754 | + | C2H1g20771 | CX1g000551 | LOC_Os01g48410 | Os01g0675000 | OsRopGEF6 | Detail |
| C1H1g18154 | 1:24,695,805-24,697,610 | - | C2H1g09998 | CX1g000957 | LOC_Os01g48420 | Os01g0675100 | - | Detail |
| C1H1g15939 | 1:24,699,722-24,700,831 | - | C2H1g00882 | CX1g000359 | LOC_Os01g48430 | Os01g0675400 | - | Detail |
| C1H1g11012 | 1:24,702,637-24,706,514 | - | C2H1g29363 | CX1g002880 | LOC_Os01g48440 | Os01g0675500 | - | Detail |
| C1H1g25883 | 1:24,718,274-24,721,591 | + | C2H1g14959 | CX1g002244 | LOC_Os01g48444 | Os01g0675700 | - | Detail |
| C1H1g16861 | 1:24,746,045-24,747,741 | + | C2H1g06845 | CX1g003850 | LOC_Os01g48530 | Os01g0676900 | - | Detail |
| C1H1g30124 | 1:24,752,742-24,754,812 | + | C2H1g01752 | CX1g000037 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| C1H1g08755 | 1:24,767,129-24,769,258 | + | C2H1g01495 | CX1g000351 | LOC_Os01g48570 | Os11g0466300 | - | Detail |
| C1H1g10109 | 1:24,772,532-24,776,786 | + | C2H1g13965 | CX1g003581 | LOC_Os01g48580 | Os01g0677500 | - | Detail |
| C1H1g07039 | 1:24,787,627-24,789,493 | - | - | - | - | Os01g0678050 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039916 | 5:2,589,295-2,589,486 | + | - | - | - | - | - | Detail |
| CX5g037943 | 5:2,592,320-2,598,332 | + | C1H5g04784 | C2H5g26954 | LOC_Os05g06110 | Os05g0153000 | - | Detail |
| CX5g037328 | 5:2,598,753-2,602,790 | + | C1H5g24254 | C2H5g10399 | LOC_Os05g06120 | Os05g0153132 | - | Detail |
| CX5g040549 | 5:2,604,728-2,607,906 | + | C1H5g04725 | C2H5g07974 | LOC_Os05g06130 | Os05g0153200 | - | Detail |
| CX5g039092 | 5:2,611,070-2,615,050 | - | C1H5g10196 | C2H5g00901 | LOC_Os05g06140 | Os05g0153300 | - | Detail |
| CX5g039715 | 5:2,619,210-2,619,368 | - | - | - | - | - | - | Detail |
| CX5g040166 | 5:2,621,143-2,626,379 | + | C1H5g03131 | C2H5g18938 | LOC_Os05g06150 | Os05g0153400 | - | Detail |
| CX5g040892 | 5:2,641,084-2,641,467 | - | - | - | - | - | - | Detail |
| CX5g039965 | 5:2,693,519-2,695,546 | + | C1H5g28483 | C2H5g19972 | LOC_Os05g06250 | Os05g0311500 | - | Detail |
| CX5g040552 | 5:2,695,829-2,702,430 | - | C1H5g03800 | C2H5g06803 | LOC_Os05g06260 | Os05g0154500 | - | Detail |
| CX5g037333 | 5:2,711,053-2,716,582 | - | C1H5g01837 | C2H5g27616 | LOC_Os05g06270 | Os05g0154600 | - | Detail |
| CX5g040216 | 5:2,724,323-2,730,630 | + | C1H5g27946 | C2H5g09642 | LOC_Os05g06280 | Os05g0154700 | SRS3, SAR1, SGL, BHS1 | Detail |
| CX5g037806 | 5:2,731,753-2,734,868 | + | C1H5g26961 | C2H5g27791 | LOC_Os05g06280 | Os05g0154800 | - | Detail |
| CX5g040502 | 5:2,735,578-2,739,049 | - | C1H5g28003 | C2H5g30402 | LOC_Os05g06290 | Os05g0154900 | - | Detail |
| CX5g038368 | 5:2,741,654-2,748,398 | - | C1H5g30938 | C2H5g11189 | LOC_Os05g06300 | Os05g0155000 | - | Detail |
| CX5g040045 | 5:2,752,020-2,754,178 | + | C1H5g03775 | C2H5g05414 | LOC_Os05g06310 | Os05g0155100 | - | Detail |
| CX5g040196 | 5:2,755,408-2,758,066 | - | C1H5g21843 | C2H5g28338 | LOC_Os05g06320 | Os05g0155200 | - | Detail |
| CX5g038322 | 5:2,762,889-2,765,971 | + | C1H5g06851 | C2H5g03225 | LOC_Os05g06330 | Os05g0155300 | - | Detail |
| CX5g036984 | 5:2,767,245-2,768,741 | - | C1H5g09648 | C2H5g24401 | LOC_Os05g06340 | Os05g0155400 | - | Detail |
| CX5g040802 | 5:2,770,975-2,771,175 | - | - | - | - | - | - | Detail |