| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03370 | 2:20,500,130-20,501,561 | + | C1H2g26519 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C2H2g08598 | 2:20,526,537-20,529,407 | + | C1H2g27996 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C2H2g05039 | 2:20,533,465-20,536,049 | - | C1H2g01402 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C2H2g24869 | 2:20,576,137-20,577,813 | - | - | - | LOC_Os09g27734 | - | - | Detail |
| C2H2g17098 | 2:20,587,097-20,591,340 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g28683 | 2:20,591,947-20,593,508 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g13289 | 2:20,599,954-20,602,598 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08650 | 2:20,605,548-20,607,139 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08973 | 2:20,608,206-20,609,564 | - | - | - | - | - | - | Detail |
| C2H2g07065 | 2:20,621,490-20,623,110 | - | C1H2g22902 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g09109 | 2:20,626,203-20,629,889 | - | C1H2g02826 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g15028 | 2:20,635,878-20,639,875 | - | C1H2g09017 | CX2g024086 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| C2H2g16141 | 2:20,648,025-20,648,882 | + | C1H2g18768 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C2H2g09753 | 2:20,655,604-20,656,650 | - | C1H2g17745 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C2H2g01273 | 2:20,658,486-20,658,890 | - | C1H2g12070 | - | - | Os02g0572300 | - | Detail |
| C2H2g16620 | 2:20,663,417-20,670,683 | - | C1H2g26185 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C2H2g00545 | 2:20,686,435-20,687,808 | - | C1H2g25932 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C2H2g01996 | 2:20,697,379-20,700,730 | - | C1H2g10452 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C2H2g05333 | 2:20,718,744-20,722,543 | + | C1H2g13546 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C2H2g01642 | 2:20,723,188-20,728,600 | - | C1H2g14408 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038518 | 5:2,374,840-2,375,872 | + | C1H5g23031 | C2H5g00872 | LOC_Os05g05620 | Os05g0148900 | - | Detail |
| CX5g038748 | 5:2,376,384-2,376,932 | + | C1H5g21277 | - | LOC_Os05g05640 | Os05g0149000 | OsPMEI21 | Detail |
| CX5g037251 | 5:2,378,129-2,378,971 | - | C1H5g23912 | - | LOC_Os05g05650 | Os05g0149100 | - | Detail |
| CX5g037656 | 5:2,379,937-2,381,028 | - | - | - | - | - | - | Detail |
| CX5g038796 | 5:2,382,244-2,389,810 | + | C1H5g20173 | C2H5g11195 | LOC_Os05g05660 | Os05g0149200 | - | Detail |
| CX5g040850 | 5:2,391,482-2,392,683 | - | C1H5g08164 | C2H5g03497 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| CX5g038120 | 5:2,397,031-2,398,234 | + | C1H5g08164 | C2H5g26975 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| CX5g040805 | 5:2,402,915-2,405,536 | + | C1H5g12513 | C2H5g16494 | LOC_Os05g05690 | Os05g0149500 | - | Detail |
| CX5g038928 | 5:2,406,494-2,412,812 | - | C1H5g08311 | C2H5g25711 | LOC_Os05g05700 | Os05g0149600 | OsCUL1-2 | Detail |
| CX5g037100 | 5:2,414,717-2,414,965 | - | - | - | - | - | - | Detail |
| CX5g038404 | 5:2,418,465-2,424,018 | + | C1H5g22304 | C2H5g15844 | LOC_Os05g05710 | Os05g0149800 | - | Detail |
| CX5g036871 | 5:2,425,253-2,431,154 | + | C1H5g26443 | C2H5g18610 | LOC_Os05g05720 | Os05g0149900 | - | Detail |
| CX5g039230 | 5:2,433,474-2,433,743 | + | C1H10g24741 | C2H1g05458 | - | - | - | Detail |
| CX5g037725 | 5:2,434,700-2,435,242 | - | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX5g039274 | 5:2,437,359-2,440,310 | - | C1H5g19233 | C2H5g17068 | LOC_Os05g05740 | Os05g0150000 | HTH5, PLPHP | Detail |
| CX5g036676 | 5:2,443,645-2,453,284 | + | C1H5g21935 | C2H5g22435 | LOC_Os05g05780 | Os05g0150300 | OsCHR727, CHR727 | Detail |
| CX5g040936 | 5:2,454,255-2,457,497 | - | C1H5g05513 | C2H5g24081 | LOC_Os05g05790 | Os05g0150400 | OsDRB3 | Detail |
| CX5g040573 | 5:2,458,699-2,458,851 | - | - | - | - | Os07g0616100 | - | Detail |
| CX5g037178 | 5:2,462,096-2,468,058 | - | C1H5g15222 | C2H5g02158 | LOC_Os05g05800 | Os05g0150500 | TIR1, OsTIR1 | Detail |
| CX5g037551 | 5:2,476,038-2,482,937 | - | C1H5g02062 | C2H5g00353 | LOC_Os05g05810 | Os05g0150600 | OsRecQsim | Detail |