| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15259 | 9:13,434,841-13,435,822 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g03422 | 9:13,437,865-13,441,018 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g09724 | 9:13,446,277-13,447,467 | + | C1H9g05369 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C2H9g14632 | 9:13,456,830-13,458,152 | + | C1H9g19041 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C2H9g30633 | 9:13,459,794-13,462,499 | - | C1H9g08312 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C2H9g21233 | 9:13,465,283-13,476,610 | + | C1H9g26425 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C2H9g00492 | 9:13,477,413-13,480,745 | + | C1H9g23177 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C2H9g23573 | 9:13,522,063-13,523,941 | + | C1H9g21686 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C2H9g14978 | 9:13,536,716-13,541,741 | + | C1H9g24554 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| C2H9g27047 | 9:13,553,018-13,564,034 | + | C1H9g08513 | CX9g054927 | LOC_Os09g26660 | Os09g0438000 | - | Detail |
| C2H9g20994 | 9:13,576,305-13,580,039 | + | C1H9g20112 | CX9g057379 | LOC_Os09g26700 | Os09g0438400 | - | Detail |
| C2H9g14306 | 9:13,584,816-13,588,809 | - | C1H9g28577 | CX9g055603 | LOC_Os09g26730 | Os09g0438700 | - | Detail |
| C2H9g11312 | 9:13,589,802-13,595,397 | - | C1H9g16805 | CX9g056328 | LOC_Os09g26760 | Os09g0439000 | - | Detail |
| C2H9g23826 | 9:13,601,591-13,602,833 | - | C1H9g29651 | CX9g056370 | LOC_Os09g26780 | Os09g0439200 | TIFY10C, OsJAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8 | Detail |
| C2H9g11140 | 9:13,611,056-13,615,575 | + | C1H9g23984 | CX9g055995 | LOC_Os09g26800 | Os09g0439400 | - | Detail |
| C2H9g08335 | 9:13,616,371-13,619,064 | + | C1H9g04697 | CX9g055543 | LOC_Os09g26810 | Os09g0439500 | - | Detail |
| C2H9g01871 | 9:13,629,522-13,633,996 | - | C1H9g08389 | CX9g057070 | LOC_Os09g26830 | Os09g0439700 | - | Detail |
| C2H9g05545 | 9:13,636,587-13,639,099 | - | C1H9g03005 | CX9g056810 | LOC_Os09g26840 | Os09g0439800 | DRO1, Dro1 | Detail |
| C2H9g26904 | 9:13,651,920-13,656,034 | + | C1H9g31362 | CX9g057829 | LOC_Os09g26870 | Os09g0440200 | - | Detail |
| C2H9g23477 | 9:13,656,062-13,663,114 | - | C1H9g12516 | CX9g057254 | LOC_Os09g26880 | Os09g0440300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038518 | 5:2,374,840-2,375,872 | + | C1H5g23031 | C2H5g00872 | LOC_Os05g05620 | Os05g0148900 | - | Detail |
| CX5g038748 | 5:2,376,384-2,376,932 | + | C1H5g21277 | - | LOC_Os05g05640 | Os05g0149000 | OsPMEI21 | Detail |
| CX5g037251 | 5:2,378,129-2,378,971 | - | C1H5g23912 | - | LOC_Os05g05650 | Os05g0149100 | - | Detail |
| CX5g037656 | 5:2,379,937-2,381,028 | - | - | - | - | - | - | Detail |
| CX5g038796 | 5:2,382,244-2,389,810 | + | C1H5g20173 | C2H5g11195 | LOC_Os05g05660 | Os05g0149200 | - | Detail |
| CX5g040850 | 5:2,391,482-2,392,683 | - | C1H5g08164 | C2H5g03497 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| CX5g038120 | 5:2,397,031-2,398,234 | + | C1H5g08164 | C2H5g26975 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| CX5g040805 | 5:2,402,915-2,405,536 | + | C1H5g12513 | C2H5g16494 | LOC_Os05g05690 | Os05g0149500 | - | Detail |
| CX5g038928 | 5:2,406,494-2,412,812 | - | C1H5g08311 | C2H5g25711 | LOC_Os05g05700 | Os05g0149600 | OsCUL1-2 | Detail |
| CX5g037100 | 5:2,414,717-2,414,965 | - | - | - | - | - | - | Detail |
| CX5g038404 | 5:2,418,465-2,424,018 | + | C1H5g22304 | C2H5g15844 | LOC_Os05g05710 | Os05g0149800 | - | Detail |
| CX5g036871 | 5:2,425,253-2,431,154 | + | C1H5g26443 | C2H5g18610 | LOC_Os05g05720 | Os05g0149900 | - | Detail |
| CX5g039230 | 5:2,433,474-2,433,743 | + | C1H10g24741 | C2H1g05458 | - | - | - | Detail |
| CX5g037725 | 5:2,434,700-2,435,242 | - | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX5g039274 | 5:2,437,359-2,440,310 | - | C1H5g19233 | C2H5g17068 | LOC_Os05g05740 | Os05g0150000 | HTH5, PLPHP | Detail |
| CX5g036676 | 5:2,443,645-2,453,284 | + | C1H5g21935 | C2H5g22435 | LOC_Os05g05780 | Os05g0150300 | OsCHR727, CHR727 | Detail |
| CX5g040936 | 5:2,454,255-2,457,497 | - | C1H5g05513 | C2H5g24081 | LOC_Os05g05790 | Os05g0150400 | OsDRB3 | Detail |
| CX5g040573 | 5:2,458,699-2,458,851 | - | - | - | - | Os07g0616100 | - | Detail |
| CX5g037178 | 5:2,462,096-2,468,058 | - | C1H5g15222 | C2H5g02158 | LOC_Os05g05800 | Os05g0150500 | TIR1, OsTIR1 | Detail |
| CX5g037551 | 5:2,476,038-2,482,937 | - | C1H5g02062 | C2H5g00353 | LOC_Os05g05810 | Os05g0150600 | OsRecQsim | Detail |