| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19435 | 4:22,521,930-22,525,097 | + | C1H4g14520 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C2H4g18486 | 4:22,525,268-22,525,756 | - | - | - | - | Os04g0521900 | - | Detail |
| C2H4g20077 | 4:22,534,017-22,534,349 | + | C1H4g13540 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C2H4g17950 | 4:22,544,733-22,545,482 | - | C1H4g14130 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g23320 | 4:22,547,687-22,548,330 | - | C1H4g20746 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g07715 | 4:22,569,851-22,572,962 | + | C1H4g23550 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C2H4g09820 | 4:22,574,353-22,575,002 | + | C1H4g25974 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C2H4g17435 | 4:22,575,109-22,580,142 | - | C1H4g18322 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C2H4g30482 | 4:22,586,419-22,588,702 | - | C1H4g27685 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C2H4g08365 | 4:22,590,483-22,590,956 | - | C1H4g26193 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C2H4g19772 | 4:22,595,491-22,595,874 | - | - | CX4g035364 | - | - | - | Detail |
| C2H4g21642 | 4:22,598,615-22,604,413 | + | C1H4g02749 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C2H4g25107 | 4:22,607,303-22,608,808 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44240 | Os04g0523600 | - | Detail |
| C2H4g28789 | 4:22,611,650-22,615,059 | - | C1H4g13330 | - | LOC_Os04g51490 | Os04g0132900 | - | Detail |
| C2H4g13084 | 4:22,618,354-22,620,895 | - | C1H4g19013 | CX4g035815 | LOC_Os01g62100 | - | - | Detail |
| C2H4g14631 | 4:22,624,546-22,626,720 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44250 | Os04g0523600 | - | Detail |
| C2H4g00229 | 4:22,627,770-22,628,705 | + | - | - | LOC_Os04g44260 | Os04g0524136 | - | Detail |
| C2H4g21424 | 4:22,634,411-22,635,207 | + | C1H4g20304 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C2H4g00588 | 4:22,658,904-22,661,183 | + | C1H4g10194 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C2H4g16476 | 4:22,662,716-22,666,298 | - | C1H4g06080 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039530 | 5:2,264,971-2,269,471 | - | C1H5g12398 | C2H5g14441 | LOC_Os05g05330 | Os05g0145700 | - | Detail |
| CX5g036969 | 5:2,274,453-2,281,487 | - | C1H5g10146 | C2H5g28800 | LOC_Os05g05354 | Os05g0146100 | - | Detail |
| CX5g040919 | 5:2,289,116-2,294,866 | - | C1H5g25798 | C2H5g07892 | LOC_Os05g05440 | Os05g0147133 | - | Detail |
| CX5g040332 | 5:2,295,705-2,299,390 | + | C1H5g22423 | C2H5g17748 | LOC_Os05g05450 | Os05g0147200 | - | Detail |
| CX5g037149 | 5:2,300,050-2,301,054 | - | C1H5g22301 | C2H5g04921 | LOC_Os05g05460 | Os05g0147300 | - | Detail |
| CX5g037339 | 5:2,301,893-2,306,157 | - | C1H5g03256 | C2H5g18351 | LOC_Os05g05470 | Os05g0147400 | - | Detail |
| CX5g036816 | 5:2,308,397-2,315,921 | + | C1H5g15984 | C2H5g29242 | LOC_Os05g05480 | Os05g0147500 | - | Detail |
| CX5g037044 | 5:2,317,093-2,317,761 | - | - | - | - | Os05g0147550 | - | Detail |
| CX5g038557 | 5:2,317,765-2,318,991 | + | C1H5g20708 | C2H5g22995 | LOC_Os05g05490 | Os05g0147600 | - | Detail |
| CX5g039135 | 5:2,320,436-2,321,620 | - | - | - | LOC_Os05g05500 | Os05g0147700 | - | Detail |
| CX5g039726 | 5:2,322,746-2,323,936 | - | - | - | LOC_Os05g05510 | Os05g0147800 | - | Detail |
| CX5g038003 | 5:2,328,861-2,329,079 | - | - | - | - | - | - | Detail |
| CX5g037507 | 5:2,330,648-2,339,933 | - | C1H5g00759 | C2H5g29270 | LOC_Os05g05550 | Os05g0146900 | - | Detail |
| CX5g040568 | 5:2,340,292-2,341,595 | + | C1H5g06824 | C2H5g24875 | LOC_Os05g05560 | Os05g0148300 | - | Detail |
| CX5g036902 | 5:2,342,315-2,342,599 | + | - | - | - | Os05g0148400 | - | Detail |
| CX5g037250 | 5:2,343,364-2,344,029 | - | - | - | - | - | - | Detail |
| CX5g040844 | 5:2,344,760-2,352,559 | - | C1H5g04550 | C2H5g08617 | LOC_Os05g05580 | Os05g0148500 | - | Detail |
| CX5g036905 | 5:2,354,523-2,359,864 | - | C1H5g16478 | C2H5g16069 | LOC_Os05g05590 | Os05g0148600 | OsNHX3 | Detail |
| CX5g038573 | 5:2,364,524-2,368,263 | + | C1H5g12042 | C2H5g09761 | LOC_Os05g05600 | Os05g0148700 | - | Detail |
| CX5g037439 | 5:2,370,216-2,370,512 | + | C1H5g16614 | - | LOC_Os05g05610 | Os05g0148800 | - | Detail |