| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02060 | 3:485,335-491,499 | - | C1H3g02926 | CX3g026446 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| C2H3g10416 | 3:492,780-495,271 | - | C1H3g26294 | CX3g031029 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| C2H3g28715 | 3:498,296-498,589 | - | C1H3g15608 | CX3g030230 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| C2H3g08607 | 3:504,319-505,372 | - | C1H3g30842 | CX3g026627 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| C2H3g00134 | 3:508,909-517,722 | + | C1H3g29372 | CX3g029050 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| C2H3g12317 | 3:518,627-525,581 | + | C1H3g12244 | CX3g028048 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| C2H3g29148 | 3:528,162-538,899 | + | C1H3g07282 | CX3g026996 | LOC_Os03g02150 | Os03g0112101 | - | Detail |
| C2H3g00838 | 3:541,524-550,028 | + | C1H3g30522 | CX3g029929 | LOC_Os03g02160 | Os03g0112700 | EHD4, OsC3H20, C3H20, Ehd4 | Detail |
| C2H3g27881 | 3:550,776-555,023 | - | C1H3g07238 | CX3g030050 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| C2H3g26177 | 3:555,421-557,266 | - | C1H3g09620 | CX3g030634 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| C2H3g13014 | 3:562,004-563,679 | - | C1H3g14295 | CX3g025559 | LOC_Os03g02190 | Os03g0113000 | - | Detail |
| C2H3g22975 | 3:566,114-569,005 | + | C1H3g06676 | CX3g028290 | LOC_Os03g02200 | Os03g0113100 | - | Detail |
| C2H3g07317 | 3:570,078-572,543 | + | C1H3g29988 | CX3g026697 | LOC_Os03g02210 | Os03g0113200 | - | Detail |
| C2H3g26703 | 3:581,466-585,763 | - | C1H3g08654 | CX3g028541 | LOC_Os03g02240 | - | - | Detail |
| C2H3g21122 | 3:596,680-601,118 | - | C1H3g00977 | CX3g027292 | LOC_Os03g02260 | Os03g0113700 | - | Detail |
| C2H3g16661 | 3:601,432-606,865 | + | C1H3g24927 | CX3g030810 | LOC_Os03g02270 | Os03g0113800 | - | Detail |
| C2H3g07262 | 3:612,061-612,657 | + | C1H3g15339 | CX3g028218 | LOC_Os03g02280 | Os03g0113900 | OsS40-4 | Detail |
| C2H3g09613 | 3:616,392-622,786 | + | C1H3g18554 | CX3g027517 | LOC_Os03g02290 | Os03g0114000 | - | Detail |
| C2H3g23619 | 3:623,865-624,590 | + | C1H3g18461 | CX3g025737 | LOC_Os03g02300 | Os03g0114100 | - | Detail |
| C2H3g25616 | 3:625,873-627,438 | - | C1H3g30974 | CX3g030259 | LOC_Os03g02310 | Os03g0114200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g036683 | 5:2,129,356-2,129,583 | - | - | - | LOC_Os05g05110 | Os05g0143000 | - | Detail |
| CX5g040648 | 5:2,139,639-2,143,379 | + | C1H5g21606 | C2H5g02199 | LOC_Os05g05130 | Os05g0143200 | - | Detail |
| CX5g038230 | 5:2,144,082-2,147,096 | - | C1H5g00987 | C2H5g18500 | LOC_Os05g05140 | Os05g0143300 | - | Detail |
| CX5g036859 | 5:2,150,379-2,152,630 | + | C1H5g04744 | C2H5g21384 | LOC_Os05g05150 | Os05g0143400 | - | Detail |
| CX5g036917 | 5:2,157,156-2,162,180 | + | C1H5g27457 | C2H5g29296 | LOC_Os05g05160 | Os05g0143500 | - | Detail |
| CX5g038908 | 5:2,164,980-2,165,171 | - | - | - | - | - | - | Detail |
| CX5g038423 | 5:2,165,564-2,166,043 | + | C1H5g29960 | C2H5g26824 | LOC_Os05g05170 | Os05g0143600 | - | Detail |
| CX5g037961 | 5:2,167,755-2,171,015 | - | C1H5g10365 | C2H5g22685 | LOC_Os05g05180 | Os05g0143700 | - | Detail |
| CX5g037824 | 5:2,175,138-2,181,831 | - | C1H5g29191 | C2H5g06932 | LOC_Os05g05200 | Os05g0144000 | - | Detail |
| CX5g039026 | 5:2,182,932-2,186,306 | + | C1H5g02281 | C2H5g15662 | LOC_Os05g05210 | Os05g0144100 | - | Detail |
| CX5g038093 | 5:2,188,072-2,192,048 | - | C1H5g15096 | C2H5g20065 | LOC_Os05g05220 | Os05g0144200 | - | Detail |
| CX5g040491 | 5:2,193,684-2,203,619 | - | C1H5g19739 | C2H5g11901 | LOC_Os05g05230 | Os05g0144300 | OsCHR719, CHR719 | Detail |
| CX5g040168 | 5:2,207,218-2,215,472 | + | C1H5g01986 | C2H5g11499 | LOC_Os05g05240 | Os05g0144400 | OsPPKL2 | Detail |
| CX5g037072 | 5:2,222,034-2,227,545 | - | C1H5g16759 | C2H5g14473 | LOC_Os05g05260 | Os05g0144800 | - | Detail |
| CX5g039685 | 5:2,232,925-2,235,523 | + | C1H5g20568 | C2H5g09730 | LOC_Os05g05270 | Os05g0144900 | - | Detail |
| CX5g036804 | 5:2,236,049-2,241,195 | - | C1H5g26722 | C2H5g16721 | LOC_Os05g05280 | Os05g0145000 | PTB1 | Detail |
| CX5g039148 | 5:2,243,316-2,243,858 | - | - | - | LOC_Os05g05290 | Os05g0145100 | - | Detail |
| CX5g037397 | 5:2,248,600-2,251,173 | + | C1H5g13013 | C2H5g12450 | LOC_Os05g05300 | Os05g0145300 | - | Detail |
| CX5g038713 | 5:2,252,167-2,254,805 | - | C1H5g17300 | C2H5g08722 | LOC_Os05g05310 | Os05g0145400 | OsVIL4 | Detail |
| CX5g038846 | 5:2,257,583-2,263,267 | - | C1H5g19785 | C2H5g11049 | LOC_Os05g05320 | Os05g0145600 | - | Detail |