| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10131 | 3:32,710,447-32,717,455 | + | C1H3g17861 | CX3g030956 | LOC_Os03g63650 | Os03g0853500 | OsBRXL2, OsBRXL4 | Detail |
| C2H3g04339 | 3:32,717,834-32,722,925 | - | C1H3g31296 | CX3g026797 | LOC_Os03g63660 | Os03g0853600 | - | Detail |
| C2H3g06882 | 3:32,727,382-32,730,249 | - | C1H3g27569 | CX3g030543 | LOC_Os03g63670 | Os03g0853700 | - | Detail |
| C2H3g26724 | 3:32,730,665-32,732,233 | + | C1H3g11918 | CX3g027709 | LOC_Os03g63680 | Os03g0853800 | - | Detail |
| C2H3g11272 | 3:32,733,216-32,735,515 | - | C1H3g26162 | CX3g030379 | LOC_Os03g63690 | Os03g0853900 | - | Detail |
| C2H3g01478 | 3:32,735,845-32,736,411 | + | - | CX3g026480 | LOC_Os03g63700 | Os03g0854000 | - | Detail |
| C2H3g19461 | 3:32,737,690-32,744,794 | - | C1H3g07991 | CX3g030851 | LOC_Os03g63710 | Os03g0854100 | - | Detail |
| C2H3g12825 | 3:32,744,981-32,748,169 | + | C1H3g06335 | CX3g030107 | LOC_Os03g63730 | Os03g0854300 | - | Detail |
| C2H3g15962 | 3:32,748,649-32,749,188 | - | - | CX3g028502 | LOC_Os03g63740 | Os03g0854400 | - | Detail |
| C2H3g05253 | 3:32,750,311-32,754,281 | + | C1H3g09693 | CX3g030892 | LOC_Os03g63750 | Os03g0854500 | - | Detail |
| C2H3g28167 | 3:32,756,363-32,757,538 | - | C1H3g19243 | CX3g029838 | LOC_Os03g63760 | Os03g0854600 | - | Detail |
| C2H3g30198 | 3:32,763,087-32,768,651 | - | C1H3g21186 | CX3g026422 | LOC_Os03g63770 | Os03g0854800 | - | Detail |
| C2H3g20473 | 3:32,781,834-32,784,244 | + | C1H3g26705 | CX3g029874 | LOC_Os03g63810 | Os03g0855100 | OsWRKY80 | Detail |
| C2H3g14845 | 3:32,785,704-32,786,183 | + | C1H3g13485 | CX3g029874 | LOC_Os03g63810 | Os03g0855100 | OsWRKY80 | Detail |
| C2H3g28127 | 3:32,801,173-32,802,288 | + | C1H3g14280 | CX3g029132 | LOC_Os03g63850 | Os03g0855500 | - | Detail |
| C2H3g23266 | 3:32,803,017-32,806,480 | + | C1H3g01539 | CX3g027978 | LOC_Os03g63860 | Os03g0855600 | - | Detail |
| C2H3g09898 | 3:32,813,856-32,814,953 | + | C1H3g10625 | CX3g027688 | LOC_Os03g63900 | Os03g0856000 | - | Detail |
| C2H3g04375 | 3:32,818,787-32,820,898 | + | C1H3g25641 | CX3g031335 | LOC_Os03g63910 | Os03g0856100 | - | Detail |
| C2H3g05256 | 3:32,821,698-32,830,143 | + | - | CX3g031335 | LOC_Os03g63910 | Os03g0856150 | - | Detail |
| C2H3g28643 | 3:32,830,440-32,832,471 | - | C1H3g22746 | CX3g030579 | LOC_Os03g63930 | Os03g0856300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |