| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23607 | 3:16,137,145-16,137,691 | + | C1H3g03549 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g24777 | 3:16,139,530-16,139,857 | - | C1H3g06307 | CX3g028435 | LOC_Os02g58170 | Os03g0563400 | - | Detail |
| C2H3g29625 | 3:16,142,020-16,143,062 | + | C1H3g03536 | - | - | - | - | Detail |
| C2H3g29941 | 3:16,143,940-16,145,359 | + | C1H3g15507 | CX9g057750 | LOC_Os03g31090 | Os03g0424500 | - | Detail |
| C2H3g02070 | 3:16,148,792-16,152,137 | + | C1H3g06288 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g13373 | 3:16,152,706-16,155,867 | - | C1H3g23569 | CX3g026358 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| C2H3g29562 | 3:16,167,058-16,172,876 | + | C1H3g07104 | CX3g025115 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| C2H3g24938 | 3:16,178,346-16,180,250 | + | C1H3g07332 | CX3g030946 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| C2H3g12524 | 3:16,198,271-16,201,931 | + | C1H3g20426 | CX3g025387 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| C2H3g01389 | 3:16,219,189-16,223,952 | - | C1H3g22127 | CX3g029401 | LOC_Os03g31260 | Os03g0426300 | - | Detail |
| C2H3g18833 | 3:16,239,408-16,239,608 | + | C1H3g16780 | CX3g025661 | LOC_Os03g31290 | Os03g0426800 | - | Detail |
| C2H3g26583 | 3:16,247,699-16,254,421 | + | C1H3g17321 | CX3g031265 | LOC_Os03g31300 | Os03g0426900 | - | Detail |
| C2H3g22373 | 3:16,281,252-16,282,125 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g09016 | 3:16,282,166-16,282,937 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g13790 | 3:16,285,724-16,292,834 | + | C1H3g10283 | CX3g031010 | LOC_Os03g31400 | Os03g0427900 | - | Detail |
| C2H3g14816 | 3:16,293,880-16,297,409 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0347900 | - | Detail |
| C2H3g18509 | 3:16,297,518-16,298,891 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0428200 | - | Detail |
| C2H3g21714 | 3:16,305,845-16,307,476 | - | C1H3g31158 | - | - | Os03g0428200 | - | Detail |
| C2H3g17080 | 3:16,311,662-16,314,940 | - | C1H8g17324 | - | LOC_Os03g04150 | - | - | Detail |
| C2H3g05528 | 3:16,362,675-16,365,594 | + | C1H3g02780 | CX3g027331 | LOC_Os03g31490 | Os03g0428800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |