| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01572 | 6:12,101,826-12,104,373 | + | C1H6g21775 | CX6g041290 | LOC_Os06g28550 | Os06g0479400 | - | Detail |
| C2H6g17787 | 6:12,140,516-12,143,241 | - | C1H6g26693 | CX6g042654 | LOC_Os06g27760 | Os06g0472000 | - | Detail |
| C2H6g20307 | 6:12,146,292-12,149,376 | + | C1H6g28055 | CX6g043194 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C2H6g16745 | 6:12,155,334-12,157,262 | + | C1H6g13928 | CX6g041953 | LOC_Os06g27790 | Os06g0472300 | - | Detail |
| C2H6g23546 | 6:12,159,711-12,166,197 | + | C1H6g06716 | CX6g043241 | LOC_Os06g27800 | Os06g0472400 | - | Detail |
| C2H6g14928 | 6:12,177,157-12,180,490 | - | C1H6g09283 | CX6g042696 | LOC_Os06g27820 | Os06g0472600 | - | Detail |
| C2H6g00222 | 6:12,182,758-12,187,307 | - | C1H6g24132 | CX6g045749 | LOC_Os06g27830 | Os06g0472700 | - | Detail |
| C2H6g02911 | 6:12,196,205-12,197,509 | + | C1H6g08584 | CX6g043316 | LOC_Os06g27850 | Os06g0472900 | - | Detail |
| C2H6g30368 | 6:12,200,948-12,205,042 | - | C1H6g02757 | CX6g041871 | LOC_Os06g27860 | Os06g0473000 | OsPHS1 | Detail |
| C2H6g00393 | 6:12,214,644-12,225,572 | - | C1H6g12249 | CX6g044841 | LOC_Os06g27890 | Os06g0473200 | MKK3, OsMKK3 | Detail |
| C2H6g27648 | 6:12,238,629-12,238,964 | + | C1H6g13779 | CX6g045224 | - | Os06g0473700 | - | Detail |
| C2H6g19265 | 6:12,239,755-12,240,270 | + | - | CX6g044901 | LOC_Os06g27910 | Os06g0473800 | - | Detail |
| C2H6g25625 | 6:12,248,683-12,258,012 | - | C1H6g03161 | CX6g044575 | LOC_Os06g27970 | Os06g0474200 | OsFIP | Detail |
| C2H6g02054 | 6:12,263,314-12,264,750 | + | - | CX6g045620 | LOC_Os06g27980 | Os06g0474300 | - | Detail |
| C2H6g05701 | 6:12,271,480-12,275,193 | - | C1H6g15989 | CX6g043983 | LOC_Os06g28000 | Os06g0474500 | - | Detail |
| C2H6g23516 | 6:12,281,140-12,281,899 | - | C1H6g14721 | CX1g001472 | LOC_Os06g28030 | Os06g0474600 | - | Detail |
| C2H6g13355 | 6:12,292,435-12,295,590 | - | C1H6g09338 | CX6g043337 | LOC_Os06g28050 | Os06g0474800 | - | Detail |
| C2H6g19156 | 6:12,301,646-12,311,311 | - | C1H6g29253 | CX6g045521 | LOC_Os06g28060 | Os06g0474900 | - | Detail |
| C2H6g22900 | 6:12,335,559-12,337,176 | - | C1H6g16352 | CX6g045494 | LOC_Os06g28124 | Os06g0475400 | - | Detail |
| C2H6g08923 | 6:12,337,992-12,340,190 | - | C1H6g31009 | CX6g045494 | LOC_Os06g28124 | Os06g0475400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |