| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24120 | 4:21,658,006-21,665,045 | - | C2H4g02441 | CX4g035949 | LOC_Os04g41950 | Os04g0496800 | - | Detail |
| C1H4g16028 | 4:21,666,662-21,668,313 | - | C2H4g29152 | CX4g032219 | LOC_Os04g41960 | Os04g0497000 | - | Detail |
| C1H4g00212 | 4:21,674,052-21,677,840 | - | C2H4g15097 | CX4g033375 | LOC_Os04g41970 | Os04g0497200 | OsGLU3 | Detail |
| C1H4g06619 | 4:21,684,026-21,684,411 | + | C2H4g03902 | CX4g036664 | LOC_Os04g41980 | Os04g0497300 | - | Detail |
| C1H4g16966 | 4:21,684,928-21,686,094 | - | C2H4g24147 | CX4g034539 | LOC_Os04g41990 | Os04g0497350 | OsATG10a | Detail |
| C1H4g21848 | 4:21,686,849-21,689,820 | - | C2H4g16343 | CX4g034309 | LOC_Os04g42000 | Os04g0497400 | - | Detail |
| C1H4g01341 | 4:21,690,598-21,694,571 | - | C2H4g27408 | CX4g031377 | LOC_Os04g42010 | Os04g0497600 | OsLa1 | Detail |
| C1H4g30019 | 4:21,697,596-21,698,703 | + | C2H4g04925 | CX4g031426 | LOC_Os04g42020 | Os04g0497700 | - | Detail |
| C1H4g01078 | 4:21,699,794-21,701,671 | + | C2H4g17364 | CX4g034966 | LOC_Os04g42030 | Os04g0497900 | SWL1 | Detail |
| C1H4g31513 | 4:21,701,767-21,702,191 | - | - | - | - | - | - | Detail |
| C1H4g01769 | 4:21,703,769-21,705,704 | + | C2H4g10025 | CX4g035157 | LOC_Os04g42040 | Os04g0498000 | - | Detail |
| C1H4g22399 | 4:21,711,685-21,713,810 | - | C2H4g24359 | CX4g033954 | - | Os04g0498200 | - | Detail |
| C1H4g02598 | 4:21,713,899-21,714,376 | - | - | - | - | - | - | Detail |
| C1H4g06863 | 4:21,716,102-21,716,449 | - | - | CX7g046065 | - | - | - | Detail |
| C1H4g24329 | 4:21,719,091-21,722,310 | + | - | CX4g034831 | LOC_Os04g42095 | - | - | Detail |
| C1H4g07127 | 4:21,724,482-21,728,730 | - | C2H4g02540 | CX4g035609 | LOC_Os04g42100 | Os04g0498700 | - | Detail |
| C1H4g28042 | 4:21,730,678-21,734,356 | + | C2H4g27959 | CX4g036667 | LOC_Os04g42110 | Os04g0498800 | - | Detail |
| C1H4g30393 | 4:21,734,901-21,736,948 | - | C2H4g04345 | CX4g033443 | LOC_Os04g42120 | Os04g0498900 | - | Detail |
| C1H4g22736 | 4:21,737,317-21,738,256 | - | - | - | - | - | - | Detail |
| C1H4g24350 | 4:21,740,272-21,742,769 | + | C2H4g13494 | CX4g032632 | LOC_Os04g42130 | Os04g0499100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |