| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g14873 | 3:4,160,670-4,175,428 | - | C2H3g15678 | CX3g025401 | LOC_Os03g09110 | Os03g0191100 | - | Detail |
| C1H3g14671 | 3:4,180,893-4,182,123 | - | C2H3g21550 | CX3g026471 | LOC_Os03g09120 | Os03g0191200 | - | Detail |
| C1H3g14495 | 3:4,193,654-4,196,002 | + | C2H3g28466 | CX3g028388 | LOC_Os03g09140 | Os03g0191400 | OsRab6B2, OsRab6a | Detail |
| C1H3g25069 | 3:4,198,716-4,202,590 | - | C2H3g00905 | CX3g027338 | LOC_Os03g09150 | Os03g0191700 | - | Detail |
| C1H3g30469 | 3:4,204,904-4,205,722 | + | C2H3g19135 | CX3g029377 | LOC_Os03g09160 | Os03g0191800 | - | Detail |
| C1H3g18769 | 3:4,211,752-4,212,642 | - | C2H3g16037 | CX3g028606 | LOC_Os03g09170 | Os03g0191900 | - | Detail |
| C1H3g13867 | 3:4,217,168-4,220,660 | - | C2H3g14345 | CX3g025223 | LOC_Os03g09180 | Os03g0192000 | - | Detail |
| C1H3g13109 | 3:4,221,101-4,223,221 | + | C2H3g00220 | CX3g026535 | LOC_Os03g09190 | Os03g0192100 | - | Detail |
| C1H3g24183 | 3:4,223,947-4,226,860 | - | C2H3g04064 | CX3g029681 | LOC_Os03g09200 | Os03g0192300 | - | Detail |
| C1H3g22125 | 3:4,238,482-4,241,113 | - | C2H3g23777 | CX3g026243 | LOC_Os03g09210 | Os03g0192400 | - | Detail |
| C1H3g21423 | 3:4,246,113-4,251,246 | + | C2H3g14962 | CX3g025389 | LOC_Os03g09220 | Os03g0192500 | PP45, OsPP45, BIPP2C1 | Detail |
| C1H3g29007 | 3:4,251,888-4,253,173 | - | C2H3g01547 | CX3g029005 | LOC_Os03g09230 | Os03g0192600 | - | Detail |
| C1H3g26414 | 3:4,256,187-4,260,220 | - | C2H3g00630 | CX3g028884 | LOC_Os03g09250 | Os03g0192700 | INO1, RINO1 | Detail |
| C1H3g18179 | 3:4,270,218-4,278,454 | + | C2H3g01275 | CX3g027446 | LOC_Os03g09270 | Os03g0192900 | - | Detail |
| C1H3g11049 | 3:4,281,798-4,288,027 | + | C2H3g19711 | CX3g025926 | LOC_Os03g09280 | Os03g0193000 | - | Detail |
| C1H3g04153 | 3:4,289,146-4,291,323 | + | C2H3g11800 | CX3g025810 | LOC_Os03g09290 | Os03g0193075 | - | Detail |
| C1H3g25160 | 3:4,292,110-4,294,322 | + | C2H3g07804 | CX3g028060 | LOC_Os03g09300 | Os03g0191700 | - | Detail |
| C1H3g05489 | 3:4,295,865-4,300,437 | - | C2H3g11506 | CX3g027000 | LOC_Os03g09310 | Os03g0193225 | - | Detail |
| C1H3g15014 | 3:4,307,648-4,308,589 | + | C2H3g05261 | CX3g026217 | LOC_Os03g09820 | Os03g0193600 | - | Detail |
| C1H3g23845 | 3:4,309,523-4,310,731 | - | C2H3g20661 | CX3g030575 | LOC_Os03g09840 | Os03g0194100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |