| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g08973 | 2:29,486,516-29,488,110 | - | C2H2g29404 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C1H2g26635 | 2:29,491,640-29,492,317 | - | C2H2g24763 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C1H2g13987 | 2:29,492,995-29,498,859 | - | C2H2g20003 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C1H2g23770 | 2:29,505,104-29,506,173 | + | C2H2g16702 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C1H2g16420 | 2:29,508,096-29,513,216 | - | C2H2g14916 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| C1H2g22906 | 2:29,514,765-29,516,017 | - | C2H2g08910 | CX2g023223 | LOC_Os02g52800 | - | - | Detail |
| C1H2g21062 | 2:29,516,257-29,516,906 | - | C2H2g30296 | CX2g023223 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| C1H2g20452 | 2:29,517,910-29,525,678 | - | C2H2g10227 | CX2g024302 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| C1H2g09699 | 2:29,529,136-29,533,815 | + | C2H2g03870 | CX2g022681 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| C1H2g10695 | 2:29,534,390-29,537,933 | - | C2H2g04249 | CX2g018835 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| C1H2g17405 | 2:29,546,391-29,546,630 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g09946 | 2:29,546,636-29,547,570 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g24330 | 2:29,548,613-29,551,351 | - | C2H2g22142 | CX2g019076 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| C1H2g03367 | 2:29,554,780-29,558,698 | - | C2H2g08643 | CX2g023311 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| C1H2g00086 | 2:29,560,116-29,561,132 | + | C2H2g01609 | CX2g020134 | LOC_Os02g52870 | Os02g0767600 | - | Detail |
| C1H2g22835 | 2:29,561,938-29,565,873 | - | C2H2g28311 | CX2g019177 | LOC_Os02g52880 | Os02g0767700 | - | Detail |
| C1H2g13024 | 2:29,586,012-29,586,637 | + | C2H2g16642 | CX2g020174 | LOC_Os02g52900 | Os02g0767900 | - | Detail |
| C1H2g31571 | 2:29,588,716-29,590,374 | - | C2H2g15864 | CX2g023130 | LOC_Os02g52910 | Os02g0768000 | - | Detail |
| C1H2g24818 | 2:29,591,237-29,593,905 | - | C2H2g21836 | CX2g024813 | LOC_Os02g52920 | Os02g0768200 | - | Detail |
| C1H2g14907 | 2:29,596,790-29,599,243 | - | C2H2g10491 | CX2g021956 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039963 | 5:1,781,782-1,782,972 | + | C1H5g05411 | C2H1g10329 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| CX5g039240 | 5:1,789,698-1,791,545 | + | C1H5g15318 | C2H5g15340 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| CX5g040556 | 5:1,792,341-1,794,524 | - | C1H5g22825 | C2H5g09071 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| CX5g040743 | 5:1,805,979-1,806,854 | + | - | C2H5g11738 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| CX5g039210 | 5:1,808,529-1,811,756 | - | C1H5g10755 | C2H5g01548 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| CX5g040238 | 5:1,815,180-1,815,392 | - | - | - | - | - | - | Detail |
| CX5g040521 | 5:1,837,246-1,843,028 | + | C1H5g30580 | C2H5g23155 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| CX5g040420 | 5:1,857,441-1,863,247 | + | C1H5g18480 | C2H5g06046 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| CX5g039843 | 5:1,864,778-1,866,447 | + | C1H5g19392 | C2H5g14079 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| CX5g040603 | 5:1,868,151-1,871,167 | + | C1H5g26357 | C2H5g14963 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| CX5g036724 | 5:1,872,091-1,877,541 | - | C1H5g12317 | C2H5g23559 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| CX5g037574 | 5:1,889,237-1,890,511 | + | C1H5g04306 | C2H5g03222 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| CX5g038449 | 5:1,905,118-1,905,987 | + | C1H5g21497 | C2H5g02825 | LOC_Os05g04690 | Os05g0138200 | - | Detail |
| CX5g037589 | 5:1,924,640-1,926,415 | + | C1H5g25088 | C2H5g19962 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| CX5g037123 | 5:1,940,682-1,941,866 | - | C1H5g18751 | C2H5g23665 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| CX5g039908 | 5:1,958,735-1,959,284 | - | - | - | - | - | - | Detail |
| CX5g038058 | 5:1,978,139-1,978,453 | - | C1H5g17291 | C2H5g03061 | - | Os05g0140000 | - | Detail |
| CX5g041027 | 5:1,979,363-1,980,885 | + | C1H5g01364 | C2H5g22528 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| CX5g039047 | 5:1,989,970-1,991,827 | + | C1H1g13588 | C2H5g28238 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| CX5g041028 | 5:1,993,963-1,996,076 | + | C1H5g06617 | C2H5g17854 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |