| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18413 | 4:29,693,561-29,699,613 | - | C1H4g12099 | CX4g034422 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| C2H4g13935 | 4:29,701,445-29,704,747 | + | C1H4g02898 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C2H4g25125 | 4:29,705,783-29,708,184 | + | C1H4g21333 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C2H4g28032 | 4:29,709,880-29,714,931 | - | C1H4g29753 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C2H4g17256 | 4:29,737,558-29,738,174 | + | C1H4g17441 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C2H4g16666 | 4:29,745,422-29,749,700 | - | C1H4g06545 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C2H4g21541 | 4:29,752,035-29,752,662 | - | C1H4g12522 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C2H4g03386 | 4:29,757,348-29,758,304 | - | C1H4g09977 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| C2H4g22422 | 4:29,766,013-29,768,955 | - | C1H4g25879 | CX4g033668 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| C2H4g06265 | 4:29,774,553-29,775,787 | + | C1H4g19205 | CX4g033580 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| C2H4g15166 | 4:29,776,488-29,781,050 | - | C1H4g22285 | CX4g034130 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| C2H4g17817 | 4:29,783,015-29,783,610 | - | C1H4g01102 | - | - | Os04g0674350 | - | Detail |
| C2H4g23831 | 4:29,783,738-29,786,479 | + | C1H4g13095 | CX4g032486 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |
| C2H4g13778 | 4:29,789,504-29,794,076 | + | C1H4g14562 | CX4g036032 | LOC_Os04g57819 | Os04g0674450 | - | Detail |
| C2H4g19163 | 4:29,798,804-29,801,306 | + | C1H4g20705 | - | - | - | - | Detail |
| C2H4g22750 | 4:29,802,403-29,805,885 | - | C1H4g25678 | CX4g034412 | LOC_Os04g57840 | Os04g0674600 | - | Detail |
| C2H4g08185 | 4:29,806,506-29,808,620 | - | C1H4g14424 | CX4g034499 | LOC_Os04g57850 | Os04g0674700 | OsBIABP1 | Detail |
| C2H4g18901 | 4:29,812,600-29,815,642 | - | C1H4g31604 | CX4g031749 | LOC_Os04g57860 | Os04g0674800 | OsRHC | Detail |
| C2H4g07191 | 4:29,818,808-29,824,861 | - | C1H4g22329 | CX4g034095 | LOC_Os04g57870 | Os04g0675000 | - | Detail |
| C2H4g13536 | 4:29,834,270-29,853,732 | + | C1H4g08555 | CX4g033430 | - | Os04g0675300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040404 | 5:1,530,862-1,537,369 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| CX5g040242 | 5:1,549,571-1,553,745 | - | C1H5g13927 | C2H5g17204 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| CX5g038388 | 5:1,554,499-1,554,978 | + | C1H5g19982 | C2H5g23034 | - | - | - | Detail |
| CX5g039763 | 5:1,561,986-1,563,560 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g04060 | Os05g0131000 | - | Detail |
| CX5g041042 | 5:1,576,347-1,579,093 | - | C1H5g00064 | C2H5g12807 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| CX5g037262 | 5:1,581,211-1,589,065 | - | C1H5g06759 | C2H5g15022 | - | - | - | Detail |
| CX5g040539 | 5:1,597,609-1,599,168 | + | C1H5g22859 | C2H5g11311 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| CX5g038241 | 5:1,601,147-1,603,060 | + | C1H5g07219 | C2H5g00026 | LOC_Os05g04160 | Os05g0132000 | - | Detail |
| CX5g039267 | 5:1,603,734-1,609,371 | - | C1H5g01586 | C2H5g29271 | LOC_Os05g04170 | Os05g0132100 | - | Detail |
| CX5g040727 | 5:1,624,641-1,628,342 | - | C1H5g08013 | C2H5g30600 | LOC_Os05g04180 | Os05g0132400 | - | Detail |
| CX5g039156 | 5:1,629,436-1,633,422 | - | C1H5g03405 | C2H5g03082 | LOC_Os05g04190 | Os05g0132500 | - | Detail |
| CX5g040630 | 5:1,634,850-1,635,339 | + | - | - | - | - | - | Detail |
| CX5g037816 | 5:1,652,065-1,653,480 | - | C1H5g18309 | C2H5g05589 | LOC_Os05g04210 | Os05g0132700 | Os2R_MYB52 | Detail |
| CX5g038861 | 5:1,664,901-1,667,694 | - | C1H5g29537 | C2H5g27002 | LOC_Os05g04220 | Os05g0133100 | - | Detail |
| CX5g036771 | 5:1,668,790-1,670,308 | + | C1H5g10914 | C2H5g26178 | LOC_Os05g04240 | Os05g0133401 | - | Detail |
| CX5g039957 | 5:1,674,321-1,684,582 | + | C1H5g20409 | C2H5g08606 | LOC_Os05g04330 | Os05g0133900 | - | Detail |
| CX5g040252 | 5:1,685,505-1,687,846 | - | C1H5g02098 | C2H5g20537 | LOC_Os05g04340 | Os05g0134000 | OsSK13 | Detail |
| CX5g038101 | 5:1,697,249-1,699,427 | + | C1H5g20836 | C2H5g03032 | LOC_Os05g04360 | Os05g0134200 | - | Detail |
| CX5g040147 | 5:1,701,171-1,705,201 | - | C1H5g08049 | C2H5g30196 | LOC_Os05g04370 | Os05g0134300 | - | Detail |
| CX5g040620 | 5:1,749,020-1,753,134 | - | C1H5g19346 | C2H5g03728 | LOC_Os05g04460 | Os05g0135100 | - | Detail |