| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g29234 | 3:9,589,591-9,592,789 | + | C1H3g09918 | CX3g029447 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| C2H3g25404 | 3:9,593,061-9,594,512 | - | C1H3g15276 | CX3g025751 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| C2H3g04492 | 3:9,605,909-9,607,258 | + | C1H3g04998 | CX3g029664 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| C2H3g27650 | 3:9,608,099-9,625,295 | - | C1H3g22410 | CX3g028723 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| C2H3g07435 | 3:9,627,515-9,639,295 | - | C1H3g02755 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C2H3g20582 | 3:9,647,619-9,648,140 | + | C1H3g18574 | CX3g026074 | LOC_Os03g19375 | Os03g0239400 | - | Detail |
| C2H3g07871 | 3:9,651,461-9,651,847 | + | C1H3g08148 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C2H3g26352 | 3:9,652,500-9,654,378 | - | C1H3g23949 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C2H3g08753 | 3:9,654,788-9,656,681 | + | C1H3g18672 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C2H3g28158 | 3:9,658,647-9,666,875 | + | C1H3g26919 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C2H3g27859 | 3:9,667,653-9,668,684 | + | C1H3g07326 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C2H3g23633 | 3:9,672,964-9,675,855 | - | C1H3g08713 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C2H3g12347 | 3:9,680,537-9,681,031 | + | C1H3g12875 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g00214 | 3:9,683,277-9,684,485 | + | C1H3g10945 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g27228 | 3:9,684,900-9,688,173 | + | C1H3g01117 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C2H3g27622 | 3:9,690,908-9,693,250 | + | C1H3g07984 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C2H3g03655 | 3:9,693,645-9,700,852 | - | C1H3g00240 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C2H3g06844 | 3:9,702,422-9,702,951 | + | C1H3g04726 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C2H3g23976 | 3:9,704,003-9,706,653 | + | C1H3g19730 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C2H3g08220 | 3:9,708,308-9,710,749 | - | C1H3g14154 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040404 | 5:1,530,862-1,537,369 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| CX5g040242 | 5:1,549,571-1,553,745 | - | C1H5g13927 | C2H5g17204 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| CX5g038388 | 5:1,554,499-1,554,978 | + | C1H5g19982 | C2H5g23034 | - | - | - | Detail |
| CX5g039763 | 5:1,561,986-1,563,560 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g04060 | Os05g0131000 | - | Detail |
| CX5g041042 | 5:1,576,347-1,579,093 | - | C1H5g00064 | C2H5g12807 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| CX5g037262 | 5:1,581,211-1,589,065 | - | C1H5g06759 | C2H5g15022 | - | - | - | Detail |
| CX5g040539 | 5:1,597,609-1,599,168 | + | C1H5g22859 | C2H5g11311 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| CX5g038241 | 5:1,601,147-1,603,060 | + | C1H5g07219 | C2H5g00026 | LOC_Os05g04160 | Os05g0132000 | - | Detail |
| CX5g039267 | 5:1,603,734-1,609,371 | - | C1H5g01586 | C2H5g29271 | LOC_Os05g04170 | Os05g0132100 | - | Detail |
| CX5g040727 | 5:1,624,641-1,628,342 | - | C1H5g08013 | C2H5g30600 | LOC_Os05g04180 | Os05g0132400 | - | Detail |
| CX5g039156 | 5:1,629,436-1,633,422 | - | C1H5g03405 | C2H5g03082 | LOC_Os05g04190 | Os05g0132500 | - | Detail |
| CX5g040630 | 5:1,634,850-1,635,339 | + | - | - | - | - | - | Detail |
| CX5g037816 | 5:1,652,065-1,653,480 | - | C1H5g18309 | C2H5g05589 | LOC_Os05g04210 | Os05g0132700 | Os2R_MYB52 | Detail |
| CX5g038861 | 5:1,664,901-1,667,694 | - | C1H5g29537 | C2H5g27002 | LOC_Os05g04220 | Os05g0133100 | - | Detail |
| CX5g036771 | 5:1,668,790-1,670,308 | + | C1H5g10914 | C2H5g26178 | LOC_Os05g04240 | Os05g0133401 | - | Detail |
| CX5g039957 | 5:1,674,321-1,684,582 | + | C1H5g20409 | C2H5g08606 | LOC_Os05g04330 | Os05g0133900 | - | Detail |
| CX5g040252 | 5:1,685,505-1,687,846 | - | C1H5g02098 | C2H5g20537 | LOC_Os05g04340 | Os05g0134000 | OsSK13 | Detail |
| CX5g038101 | 5:1,697,249-1,699,427 | + | C1H5g20836 | C2H5g03032 | LOC_Os05g04360 | Os05g0134200 | - | Detail |
| CX5g040147 | 5:1,701,171-1,705,201 | - | C1H5g08049 | C2H5g30196 | LOC_Os05g04370 | Os05g0134300 | - | Detail |
| CX5g040620 | 5:1,749,020-1,753,134 | - | C1H5g19346 | C2H5g03728 | LOC_Os05g04460 | Os05g0135100 | - | Detail |